RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 OR51M1Q9H341 326 aa5.08□□□□□ -1.6
PRPF4B-208ENST00000490653 HSPB11Q9Y547 144 aa5.08□□□□□ -1.6
PRPF4B-208ENST00000490653 TRAV26-1A0A087WT03 109 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 C7orf71A4D174 169 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 KLLNB2CW77 178 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 SSNA1O43805 119 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 PRAF2O60831 178 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 LEPP41159 167 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 RANP62826 216 aaKnown RBP5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 ESRGQ1W209 222 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 Q5BKY6 102 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 FFAR4Q5NUL3 377 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 ZNF493Q6ZR52 646 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 C9orf47Q6ZRZ4 202 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 LINC00336Q6ZUF6 198 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 CCDC28AQ8IWP9 274 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 C11orf72Q8NBR9 251 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 MRPL53Q96EL3 112 aaKnown RBP5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 LINC00477Q96M19 166 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 C20orf144Q9BQM9 153 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 PAXXQ9BUH6 204 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 MBD2Q9UBB5 411 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 RNF24Q9Y225 148 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 FUT9Q9Y231 359 aa5.07□□□□□ -1.6
PRPF4B-208ENST00000490653 DNAH5Q8TE73 4624 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 HMGB3O15347 200 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 MPDU1O75352 247 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 IGHV3-53P01767 116 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 SLC25A5P05141 298 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 CRISP2P16562 243 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 RPL12P30050 165 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 CYCSP99999 105 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 SSX7Q7RTT5 188 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 C15orf53Q8NAA6 179 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 Q8TAT8 98 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 VSIG2Q96IQ7 327 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 ODF3Q96PU9 254 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 ATP5SQ99766 215 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 ATG101Q9BSB4 218 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 ZNF492Q9P255 531 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 PRELID1Q9Y255 219 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 ALG5Q9Y673 324 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 MUC4Q99102 2169 aa5.06□□□□□ -1.6
PRPF4B-208ENST00000490653 NBDYA0A0U1RRE5 68 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 SNURFLB1AK76 121 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 OR7C2O60412 319 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 GPX1P07203 203 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 RAB2AP61019 212 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 DAZ2Q13117 558 aaKnown RBP5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 PDE6HQ13956 83 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 MUC21Q5SSG8 566 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 C1orf134Q5TEV5 83 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 EIF4E3Q8N5X7 224 aaKnown RBP5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 RXFP4Q8TDU9 374 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 TVP23CQ96ET8 276 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 PYGO2Q9BRQ0 406 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 KRTAP1-5Q9BYS1 174 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 Q9H3A6 140 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 MRPL16Q9NX20 251 aaKnown RBP5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 MDFICQ9P1T7 246 aa5.05□□□□□ -1.6
PRPF4B-208ENST00000490653 IGHV1OR15-1A0A075B7D0 117 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 A0A096LPF7 62 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 TRGV1A0A0A0MS02 117 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 PGPA6NDG6 321 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 DIRC3C9JPN6 131 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 GNRH2O43555 120 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 SPINK4O60575 86 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 M6PRP20645 277 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 ZNF138P52744 262 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 ANXA2RQ3ZCQ2 193 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 TMEM78Q5T7P6 136 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 SCGB1C1Q8TD33 95 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 GNPNAT1Q96EK6 184 aaPredicted RBP5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 SGK494Q96LW2 274 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 HYLS1Q96M11 299 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 LINC00467Q9BRT7 94 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 MRPL32Q9BYC8 188 aaKnown RBP5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 Q9H8V8 135 aa5.04□□□□□ -1.6
PRPF4B-208ENST00000490653 C17orf112F2Z3M2 114 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 IFNA5P01569 189 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 CCL18P55774 89 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 TCL1AP56279 114 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 DEFA1P59665 94 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 DEFA3P59666 94 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 GNG5P63218 68 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 UBE2L3P68036 154 aaKnown RBP5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 C6orf223Q8N319 242 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 RPH3ALQ9UNE2 315 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 TNFRSF18Q9Y5U5 241 aa5.03□□□□□ -1.6
PRPF4B-208ENST00000490653 FAT1Q14517 4588 aa5.02□□□□□ -1.61
PRPF4B-208ENST00000490653 TRGV2A0A075B6R0 118 aa5.02□□□□□ -1.61
PRPF4B-208ENST00000490653 TRAV8-1A0A0A6YYK1 113 aa5.02□□□□□ -1.61
PRPF4B-208ENST00000490653 SFTA3P0C7M3 94 aa5.02□□□□□ -1.61
PRPF4B-208ENST00000490653 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
PRPF4B-208ENST00000490653 ZNF266Q14584 549 aa5.02□□□□□ -1.61
PRPF4B-208ENST00000490653 F6UZH7 168 aa5.01□□□□□ -1.61
PRPF4B-208ENST00000490653 NMBP08949 121 aa5.01□□□□□ -1.61
PRPF4B-208ENST00000490653 ATP6V0CP27449 155 aa5.01□□□□□ -1.61
PRPF4B-208ENST00000490653 CSN1S1P47710 185 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms