RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 PSG8Q9UQ74 426 aa12.36□□□□□ -0.43
RAPGEF3-212ENST00000490387 TRBV6-1A0A0K0K1D8 114 aa12.35□□□□□ -0.43
RAPGEF3-212ENST00000490387 RBFOX3A6NFN3 312 aa12.35□□□□□ -0.43
RAPGEF3-212ENST00000490387 INSP01308 110 aa12.35□□□□□ -0.43
RAPGEF3-212ENST00000490387 TMEM183BQ1AE95 376 aa12.35□□□□□ -0.43
RAPGEF3-212ENST00000490387 Q86TA4 180 aa12.35□□□□□ -0.43
RAPGEF3-212ENST00000490387 FMC1Q96HJ9 113 aa12.35□□□□□ -0.43
RAPGEF3-212ENST00000490387 LYSTQ99698 3801 aa12.34□□□□□ -0.43
RAPGEF3-212ENST00000490387 PDE6DO43924 150 aa12.34□□□□□ -0.43
RAPGEF3-212ENST00000490387 AKR1C3P42330 323 aa12.34□□□□□ -0.43
RAPGEF3-212ENST00000490387 CLLU1Q5K131 121 aa12.34□□□□□ -0.43
RAPGEF3-212ENST00000490387 C20orf144Q9BQM9 153 aa12.34□□□□□ -0.43
RAPGEF3-212ENST00000490387 X6R8D5 127 aa12.34□□□□□ -0.43
RAPGEF3-212ENST00000490387 C7orf71A4D174 169 aa12.33□□□□□ -0.44
RAPGEF3-212ENST00000490387 RGS13O14921 159 aa12.33□□□□□ -0.44
RAPGEF3-212ENST00000490387 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
RAPGEF3-212ENST00000490387 ZNF324O75467 553 aaPredicted RBP12.33□□□□□ -0.44
RAPGEF3-212ENST00000490387 BTN1A1Q13410 526 aa12.33□□□□□ -0.44
RAPGEF3-212ENST00000490387 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
RAPGEF3-212ENST00000490387 PRNTQ86SH4 94 aa12.33□□□□□ -0.44
RAPGEF3-212ENST00000490387 J3KRW8 73 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 LTAP01374 205 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 GPX1P07203 203 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 COX8CQ7Z4L0 72 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 C8orf49Q96NF6 230 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 NEU1Q99519 415 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 DERL1Q9BUN8 251 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 TREM1Q9NP99 234 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 GOLT1BQ9Y3E0 138 aa12.32□□□□□ -0.44
RAPGEF3-212ENST00000490387 TRAV12-3A0A0B4J271 114 aa12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 S100A9P06702 114 aaKnown RBP12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 RNASE4P34096 147 aaKnown RBP12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 RAB14P61106 215 aa12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 UBE2G1P62253 170 aa12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 SAPCD1Q5SSQ6 148 aa12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 Q6AWC8 147 aa12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 Q6ZQT7 251 aa12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 TMEM256Q8N2U0 113 aa12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 NDFIP1Q9BT67 221 aa12.31□□□□□ -0.44
RAPGEF3-212ENST00000490387 TMEM250H0YL14 139 aa12.3□□□□□ -0.44
RAPGEF3-212ENST00000490387 RPL35P42766 123 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-212ENST00000490387 Q8NAQ8 132 aa12.3□□□□□ -0.44
RAPGEF3-212ENST00000490387 EIF5A2Q9GZV4 153 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-212ENST00000490387 ZFP30Q9Y2G7 519 aa12.3□□□□□ -0.44
RAPGEF3-212ENST00000490387 SACSQ9NZJ4 4579 aa12.29□□□□□ -0.44
RAPGEF3-212ENST00000490387 H7BYZ3 331 aa12.29□□□□□ -0.44
RAPGEF3-212ENST00000490387 ZNF80P51504 273 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-212ENST00000490387 TAS2R60P59551 318 aa12.29□□□□□ -0.44
RAPGEF3-212ENST00000490387 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
RAPGEF3-212ENST00000490387 MED9Q9NWA0 146 aa12.29□□□□□ -0.44
RAPGEF3-212ENST00000490387 IGHV3OR16-12A0A075B7B8 117 aa12.28□□□□□ -0.44
RAPGEF3-212ENST00000490387 A0A0J9YWU9 116 aa12.28□□□□□ -0.44
RAPGEF3-212ENST00000490387 SMIM9A6NGZ8 99 aa12.28□□□□□ -0.44
RAPGEF3-212ENST00000490387 MIFP14174 115 aa12.28□□□□□ -0.44
RAPGEF3-212ENST00000490387 SRSF3P84103 164 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-212ENST00000490387 TMEM183AQ8IXX5 376 aa12.28□□□□□ -0.44
RAPGEF3-212ENST00000490387 LINC00467Q9BRT7 94 aa12.28□□□□□ -0.44
RAPGEF3-212ENST00000490387 NIPSNAP3BQ9BS92 247 aa12.28□□□□□ -0.44
RAPGEF3-212ENST00000490387 RYR2Q92736 4967 aa12.27□□□□□ -0.44
RAPGEF3-212ENST00000490387 TRBV20OR9-2A0A075B6H5 130 aa12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 C9JQL5 133 aa12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 GCGP01275 180 aa12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 PRM2P04554 102 aa12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 SRP19P09132 144 aaKnown RBP12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 SMUG1Q53HV7 270 aa12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 ZC2HC1AQ96GY0 325 aa12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 LINC01587Q99440 93 aa12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 PYGO2Q9BRQ0 406 aa12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 TMEM208Q9BTX3 173 aa12.27□□□□□ -0.45
RAPGEF3-212ENST00000490387 IGHV4-28A0A0C4DH34 117 aa12.26□□□□□ -0.45
RAPGEF3-212ENST00000490387 RAB19A4D1S5 217 aa12.26□□□□□ -0.45
RAPGEF3-212ENST00000490387 BAGE2Q86Y30 109 aa12.26□□□□□ -0.45
RAPGEF3-212ENST00000490387 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
RAPGEF3-212ENST00000490387 SMDT1Q9H4I9 107 aa12.26□□□□□ -0.45
RAPGEF3-212ENST00000490387 TRAV21A0A0B4J279 112 aa12.25□□□□□ -0.45
RAPGEF3-212ENST00000490387 CXorf65A6NEN9 183 aa12.25□□□□□ -0.45
RAPGEF3-212ENST00000490387 ZNF705GA8MUZ8 300 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF3-212ENST00000490387 IGLV2-8P01709 118 aa12.25□□□□□ -0.45
RAPGEF3-212ENST00000490387 PFN1P07737 140 aaKnown RBP12.25□□□□□ -0.45
RAPGEF3-212ENST00000490387 CRIP1P50238 77 aa12.25□□□□□ -0.45
RAPGEF3-212ENST00000490387 CENPWQ5EE01 88 aa12.25□□□□□ -0.45
RAPGEF3-212ENST00000490387 NHLRC2Q8NBF2 726 aa12.25□□□□□ -0.45
RAPGEF3-212ENST00000490387 PARLQ9H300 379 aa12.25□□□□□ -0.45
RAPGEF3-212ENST00000490387 PLAC8L1A1L4L8 177 aa12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 C9JCJ5 164 aa12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 AZU1P20160 251 aa12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 PEA15Q15121 130 aa12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 RRN3P1Q2M238 152 aa12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 ZNF674Q2M3X9 581 aa12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 RNASE8Q8TDE3 154 aaKnown RBP12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 SMIM12Q96EX1 92 aa12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 C11orf21Q9P2W6 132 aa12.24□□□□□ -0.45
RAPGEF3-212ENST00000490387 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
RAPGEF3-212ENST00000490387 GNG4P50150 75 aa12.23□□□□□ -0.45
RAPGEF3-212ENST00000490387 ANXA2RQ3ZCQ2 193 aa12.23□□□□□ -0.45
RAPGEF3-212ENST00000490387 NUPR2A6NF83 97 aa12.22□□□□□ -0.45
RAPGEF3-212ENST00000490387 DEFB4AO15263 64 aa12.22□□□□□ -0.45
RAPGEF3-212ENST00000490387 EIF4E3Q8N5X7 224 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms