RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 LAMA3Q16787 3333 aa-1.67□□□□□ -2.68
CBWD1-216ENST00000489272 CELSR3Q9NYQ7 3312 aa-1.67□□□□□ -2.68
CBWD1-216ENST00000489272 NUP210LQ5VU65 1888 aa-1.67□□□□□ -2.68
CBWD1-216ENST00000489272 MYO7BQ6PIF6 2116 aa-1.67□□□□□ -2.68
CBWD1-216ENST00000489272 M0R3E3 92 aa-1.68□□□□□ -2.68
CBWD1-216ENST00000489272 Q5VSD8 79 aa-1.68□□□□□ -2.68
CBWD1-216ENST00000489272 CSAG1Q6PB30 78 aa-1.68□□□□□ -2.68
CBWD1-216ENST00000489272 IFT20Q8IY31 132 aa-1.68□□□□□ -2.68
CBWD1-216ENST00000489272 DNAH9Q9NYC9 4486 aa-1.68□□□□□ -2.68
CBWD1-216ENST00000489272 KIAA0100Q14667 2235 aaKnown RBP-1.68□□□□□ -2.68
CBWD1-216ENST00000489272 ABCA13Q86UQ4 5058 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 CDK13Q14004 1512 aaKnown RBP-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 PPRC1Q5VV67 1664 aaKnown RBP-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 HIGD1CA8MV81 97 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 TPM3P06753 285 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 CXCL1P09341 107 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 SPRR1AP35321 89 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 ARPP19P56211 112 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 ISOC1Q96CN7 298 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 ANK1P16157 1881 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 PLCE1Q9P212 2302 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 TRPM1Q7Z4N2 1603 aa-1.69□□□□□ -2.68
CBWD1-216ENST00000489272 N4BP2Q86UW6 1770 aaPredicted RBP-1.7□□□□□ -2.68
CBWD1-216ENST00000489272 K7EQZ3 153 aa-1.7□□□□□ -2.68
CBWD1-216ENST00000489272 TMEM97Q5BJF2 176 aa-1.7□□□□□ -2.68
CBWD1-216ENST00000489272 TRAPPC5Q8IUR0 188 aa-1.7□□□□□ -2.68
CBWD1-216ENST00000489272 EFCAB11Q9BUY7 163 aa-1.7□□□□□ -2.68
CBWD1-216ENST00000489272 ASB4Q9Y574 426 aa-1.7□□□□□ -2.68
CBWD1-216ENST00000489272 K7ERJ3 54 aa-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 M0QX08 132 aa-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 IGF2P01344 180 aa-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 PHBP35232 272 aa-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 FAM216BQ8N7L0 139 aa-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 SPRR2FQ96RM1 72 aa-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 BPESC1Q9GZL8 116 aa-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 BIN3Q9NQY0 253 aa-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 CTNNBIP1Q9NSA3 81 aaPredicted RBP-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 NISCHQ9Y2I1 1504 aa-1.71□□□□□ -2.68
CBWD1-216ENST00000489272 BIVM-ERCC5R4GMW8 1640 aa-1.72□□□□□ -2.68
CBWD1-216ENST00000489272 HIST1H2BKO60814 126 aa-1.72□□□□□ -2.68
CBWD1-216ENST00000489272 HIST1H2BJP06899 126 aa-1.72□□□□□ -2.68
CBWD1-216ENST00000489272 CCDC42Q96M95 316 aa-1.72□□□□□ -2.68
CBWD1-216ENST00000489272 DSCR8Q96T75 97 aa-1.72□□□□□ -2.68
CBWD1-216ENST00000489272 MRPL36Q9P0J6 103 aaKnown RBP-1.72□□□□□ -2.68
CBWD1-216ENST00000489272 NBASA2RRP1 2371 aa-1.72□□□□□ -2.69
CBWD1-216ENST00000489272 LAMB1P07942 1786 aa-1.72□□□□□ -2.69
CBWD1-216ENST00000489272 KIAA1549LQ6ZVL6 1849 aa-1.73□□□□□ -2.69
CBWD1-216ENST00000489272 GVQW2A0A096LPI5 108 aaPredicted RBP-1.73□□□□□ -2.69
CBWD1-216ENST00000489272 A0A0G2JMM0 328 aa-1.73□□□□□ -2.69
CBWD1-216ENST00000489272 A0A1W2PPB8 328 aa-1.73□□□□□ -2.69
CBWD1-216ENST00000489272 KIR3DP1A8MWS1 328 aa-1.73□□□□□ -2.69
CBWD1-216ENST00000489272 TPM4P67936 248 aa-1.73□□□□□ -2.69
CBWD1-216ENST00000489272 TPRKBQ9Y3C4 175 aa-1.73□□□□□ -2.69
CBWD1-216ENST00000489272 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 TRAV5A0A0B4J249 113 aa-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 F2Z2F3 143 aa-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 M0R2T5 61 aa-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 ATP5HO75947 161 aa-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 CST7O76096 145 aa-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 IZUMO2Q6UXV1 221 aa-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 C3orf62Q6ZUJ4 267 aa-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 LLPHQ9BRT6 129 aaKnown RBP-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 LRRK2Q5S007 2527 aa-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 CPDO75976 1380 aa-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 BLMP54132 1417 aaPredicted RBP-1.74□□□□□ -2.69
CBWD1-216ENST00000489272 FRMPD1Q5SYB0 1578 aa-1.75□□□□□ -2.69
CBWD1-216ENST00000489272 A0A087WTM6 91 aa-1.75□□□□□ -2.69
CBWD1-216ENST00000489272 SMIM23A6NLE4 172 aa-1.75□□□□□ -2.69
CBWD1-216ENST00000489272 BANF1O75531 89 aa-1.75□□□□□ -2.69
CBWD1-216ENST00000489272 SPAG11AQ6PDA7 123 aa-1.75□□□□□ -2.69
CBWD1-216ENST00000489272 CCL4L1Q8NHW4 92 aa-1.75□□□□□ -2.69
CBWD1-216ENST00000489272 OR4C12Q96R67 309 aa-1.75□□□□□ -2.69
CBWD1-216ENST00000489272 ITPR1Q14643 2758 aa-1.75□□□□□ -2.69
CBWD1-216ENST00000489272 BBIP1A8MTZ0 92 aa-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 HMGB3O15347 200 aaKnown RBP-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 C1QBP02746 253 aa-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 INSL3P51460 131 aa-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 EMX2Q04743 252 aa-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 SIGMAR1Q99720 223 aa-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 ACACAQ13085 2346 aa-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 MYH9P35579 1960 aaKnown RBP-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 VPS13BQ7Z7G8 4022 aa-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 USF3Q68DE3 2245 aa-1.76□□□□□ -2.69
CBWD1-216ENST00000489272 TNS1Q9HBL0 1735 aaKnown RBP-1.77□□□□□ -2.69
CBWD1-216ENST00000489272 C3orf85A0A1B0GTC6 90 aa-1.77□□□□□ -2.69
CBWD1-216ENST00000489272 MSMO1Q15800 293 aa-1.77□□□□□ -2.69
CBWD1-216ENST00000489272 SNCBQ16143 134 aa-1.77□□□□□ -2.69
CBWD1-216ENST00000489272 TCTEX1D1Q8N7M0 179 aa-1.77□□□□□ -2.69
CBWD1-216ENST00000489272 BTF3L4Q96K17 158 aa-1.77□□□□□ -2.69
CBWD1-216ENST00000489272 NMNAT1Q9HAN9 279 aaPredicted RBP-1.77□□□□□ -2.69
CBWD1-216ENST00000489272 CCDC144AA2RUR9 1427 aa-1.77□□□□□ -2.69
CBWD1-216ENST00000489272 MTORP42345 2549 aa-1.77□□□□□ -2.69
CBWD1-216ENST00000489272 DNAH11Q96DT5 4516 aa-1.78□□□□□ -2.69
CBWD1-216ENST00000489272 DYNC1H1Q14204 4646 aaKnown RBP-1.78□□□□□ -2.69
CBWD1-216ENST00000489272 CCDC168Q8NDH2 2452 aa-1.78□□□□□ -2.69
CBWD1-216ENST00000489272 RPP14O95059 124 aaKnown RBP-1.78□□□□□ -2.69
CBWD1-216ENST00000489272 LYPLA2O95372 231 aa-1.78□□□□□ -2.69
CBWD1-216ENST00000489272 TAF1AQ15573 450 aaPredicted RBP-1.78□□□□□ -2.69
CBWD1-216ENST00000489272 CIB3Q96Q77 187 aaPredicted RBP-1.78□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms