RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 TMEM256Q8N2U0 113 aa8.28□□□□□ -1.08
COL21A1-211ENST00000488912 BTF3L4Q96K17 158 aa8.28□□□□□ -1.08
COL21A1-211ENST00000488912 VPS25Q9BRG1 176 aa8.28□□□□□ -1.08
COL21A1-211ENST00000488912 LAMTOR2Q9Y2Q5 125 aa8.28□□□□□ -1.08
COL21A1-211ENST00000488912 A0A1B0GUS0 222 aa8.27□□□□□ -1.09
COL21A1-211ENST00000488912 CCL24O00175 119 aa8.27□□□□□ -1.09
COL21A1-211ENST00000488912 ISLRO14498 428 aa8.27□□□□□ -1.09
COL21A1-211ENST00000488912 RPL11P62913 178 aaKnown RBP8.27□□□□□ -1.09
COL21A1-211ENST00000488912 CENPWQ5EE01 88 aa8.27□□□□□ -1.09
COL21A1-211ENST00000488912 RNF182Q8N6D2 247 aa8.27□□□□□ -1.09
COL21A1-211ENST00000488912 SGK494Q96LW2 274 aa8.27□□□□□ -1.09
COL21A1-211ENST00000488912 UQCR10Q9UDW1 63 aa8.27□□□□□ -1.09
COL21A1-211ENST00000488912 PAM16Q9Y3D7 125 aa8.27□□□□□ -1.09
COL21A1-211ENST00000488912 IGKV3-7A0A075B6H7 116 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 ADAMTSL5Q6ZMM2 481 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 GOLT1AQ6ZVE7 132 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 OR9G4Q8NGQ1 327 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 SLC50A1Q9BRV3 221 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 TENM1Q9UKZ4 2725 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 TRAV8-1A0A0A6YYK1 113 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 TRAV8-2A0A0B4J237 113 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 C9JCJ5 164 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 GNG4P50150 75 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 NSUN5P1Q3KNT7 163 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 TCF24Q7RTU0 167 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 OR4C5Q8NGB2 326 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 SMIM12Q96EX1 92 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 IGF2BP2-AS1Q96M15 143 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 NRN1Q9NPD7 142 aa8.26□□□□□ -1.09
COL21A1-211ENST00000488912 ATRQ13535 2644 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 DIRC3C9JPN6 131 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 PEMTQ9UBM1 199 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 MRPS16Q9Y3D3 137 aaKnown RBP8.25□□□□□ -1.09
COL21A1-211ENST00000488912 KLF12Q9Y4X4 402 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 SOCS3O14543 225 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 UBE2G1P62253 170 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 FOXL1Q12952 345 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 NHLRC2Q8NBF2 726 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 OCC1Q8TAD7 63 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 C16orf92Q96LL3 132 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 CST9LQ9H4G1 147 aa8.25□□□□□ -1.09
COL21A1-211ENST00000488912 K7EN84 100 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 M0QZ24 198 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 IGLV2-11P01706 119 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 IGLC3P0DOY3 106 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 CSN1S1P47710 185 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 LINC00310P59036 64 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 NDUFA11Q86Y39 141 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 Q8N976 141 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 FMC1Q96HJ9 113 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 TP53TG3Q9ULZ0 132 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 IGKV2-40A0A087WW87 121 aaPredicted RBP8.24□□□□□ -1.09
COL21A1-211ENST00000488912 IGKV2D-40P01614 121 aaPredicted RBP8.24□□□□□ -1.09
COL21A1-211ENST00000488912 IGLV2-8P01709 118 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 CSN3P07498 182 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 LCN12Q6JVE5 192 aa8.24□□□□□ -1.09
COL21A1-211ENST00000488912 PRAC2D3DTV9 90 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 CD33P20138 364 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 KCNIP4Q6PIL6 250 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 Q86TA4 180 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 TMEM75Q8N9X5 138 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 DCANP1Q8TF63 244 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 C20orf173Q96LM9 149 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 TRAPPC1Q9Y5R8 145 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 LY96Q9Y6Y9 160 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 K7EQM0 130 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 LTAP01374 205 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 HNRNPA3P51991 378 aaKnown RBP8.23□□□□□ -1.09
COL21A1-211ENST00000488912 PSG3Q16557 428 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 BAGE2Q86Y30 109 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 ASCL2Q99929 193 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 MS4A6AQ9H2W1 248 aa8.23□□□□□ -1.09
COL21A1-211ENST00000488912 SORL1Q92673 2214 aa8.22□□□□□ -1.09
COL21A1-211ENST00000488912 A6NJY4 79 aa8.22□□□□□ -1.09
COL21A1-211ENST00000488912 OVOL1O14753 267 aa8.22□□□□□ -1.09
COL21A1-211ENST00000488912 PRNTQ86SH4 94 aa8.22□□□□□ -1.09
COL21A1-211ENST00000488912 WFDC3Q8IUB2 231 aa8.22□□□□□ -1.09
COL21A1-211ENST00000488912 SERTM2A0A1B0GWG4 89 aa8.21□□□□□ -1.09
COL21A1-211ENST00000488912 MGST1P10620 155 aaKnown RBP8.21□□□□□ -1.09
COL21A1-211ENST00000488912 KRTAP24-1Q3LI83 254 aa8.21□□□□□ -1.09
COL21A1-211ENST00000488912 SPATA45Q537H7 98 aa8.21□□□□□ -1.09
COL21A1-211ENST00000488912 MRPL53Q96EL3 112 aaKnown RBP8.21□□□□□ -1.09
COL21A1-211ENST00000488912 VGLL1Q99990 258 aa8.21□□□□□ -1.09
COL21A1-211ENST00000488912 Q6ZN92 141 aa8.21□□□□□ -1.1
COL21A1-211ENST00000488912 PRIMA1Q86XR5 153 aa8.21□□□□□ -1.1
COL21A1-211ENST00000488912 DYNLRB2Q8TF09 96 aa8.21□□□□□ -1.1
COL21A1-211ENST00000488912 CLEC5AQ9NY25 188 aa8.21□□□□□ -1.1
COL21A1-211ENST00000488912 PSG8Q9UQ74 426 aa8.21□□□□□ -1.1
COL21A1-211ENST00000488912 TRBV6-1A0A0K0K1D8 114 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 K7ERU9 68 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 DEFB1P60022 68 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 TMEM61Q8N0U2 210 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 Q8TAT8 98 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 SFRP2Q96HF1 295 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 CITED1Q99966 193 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 MLST8Q9BVC4 326 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 K7EQG2 157 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 ERCC8Q13216 396 aa8.2□□□□□ -1.1
COL21A1-211ENST00000488912 FBN1P35555 2871 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms