RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 CCL19Q99731 98 aa0.42□□□□□ -2.34
PTPN4-212ENST00000488896 NDUFAF1Q9Y375 327 aa0.42□□□□□ -2.34
PTPN4-212ENST00000488896 HSPB11Q9Y547 144 aa0.42□□□□□ -2.34
PTPN4-212ENST00000488896 PTPRDP23468 1912 aa0.42□□□□□ -2.34
PTPN4-212ENST00000488896 SYNMO15061 1565 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 CNTRLQ7Z7A1 2325 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 MUC4Q99102 2169 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 LOC101927531A0A1B0GV80 90 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 FXYD1O00168 92 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 SMIM24O75264 130 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 TCRAP04437 139 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 SLC25A5P05141 298 aaKnown RBP0.41□□□□□ -2.34
PTPN4-212ENST00000488896 SDC4P31431 198 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 RPL22P35268 128 aaKnown RBP0.41□□□□□ -2.34
PTPN4-212ENST00000488896 DR1Q01658 176 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 RHOHQ15669 191 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 ZNF56Q15929 161 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 OR8I2Q8N0Y5 310 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 C10orf111Q8N326 155 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 MORN4Q8NDC4 146 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 PLAC4Q8WY50 150 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 LINC00208Q96KT6 92 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 DDA1Q9BW61 102 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 LPAR5Q9H1C0 372 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 GINS2Q9Y248 185 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 MPC1Q9Y5U8 109 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 RFX7Q2KHR2 1363 aa0.41□□□□□ -2.34
PTPN4-212ENST00000488896 MYLKQ15746 1914 aa0.4□□□□□ -2.34
PTPN4-212ENST00000488896 BCL9O00512 1426 aa0.4□□□□□ -2.34
PTPN4-212ENST00000488896 UBR2Q8IWV8 1755 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 DLC1Q96QB1 1528 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 A0A0G2JMM0 328 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 A0A0J9YY99 117 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 DEGS1O15121 323 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 DPM2O94777 84 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 HIST1H1BP16401 226 aaKnown RBP0.4□□□□□ -2.35
PTPN4-212ENST00000488896 PDE6GP18545 87 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 ZNF137PP52743 207 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 CAV3P56539 151 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 HSD17B12Q53GQ0 312 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 Q6ZS92 163 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 CCL4L1Q8NHW4 92 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 OTOSQ8NHW6 89 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 AIF1LQ9BQI0 150 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 BATF3Q9NR55 127 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 SMPXQ9UHP9 88 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 PEAK1Q9H792 1746 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 A2MP01023 1474 aa0.4□□□□□ -2.35
PTPN4-212ENST00000488896 TRPM7Q96QT4 1865 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 FGD6Q6ZV73 1430 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 TRAPPC8Q9Y2L5 1435 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 IFITM5A6NNB3 132 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 J3KT08 172 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 UQCRQO14949 82 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 TPST1O60507 370 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 IGHV3-30P01768 117 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 CCKP06307 115 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 IGHV3-30-5P0DP03 117 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 POLR2JP52435 117 aaKnown RBP0.39□□□□□ -2.35
PTPN4-212ENST00000488896 FXYD6P3P58550 94 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 B2MP61769 119 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 SPATA8Q6RVD6 105 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 LYPD5Q6UWN5 251 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 TOMM20LQ6UXN7 152 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 TAC4Q86UU9 113 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 OR5A2Q8NGI9 324 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 LZICQ8WZA0 190 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 BANF2Q9H503 90 aa0.39□□□□□ -2.35
PTPN4-212ENST00000488896 COL1A1P02452 1464 aaPredicted RBP0.39□□□□□ -2.35
PTPN4-212ENST00000488896 COL24A1Q17RW2 1714 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 ZDBF2Q9HCK1 2354 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 TRBV7-6A0A0J9YX20 115 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 HIGD1CA8MV81 97 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 C9JAW5 83 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 TNFSF15O95150 251 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 LY6G6CO95867 125 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 APOC1P02654 83 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 SPINK7P58062 85 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 RPS28P62857 69 aaKnown RBP0.38□□□□□ -2.35
PTPN4-212ENST00000488896 OR8B8Q15620 311 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 XAF1Q6GPH4 301 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 IZUMO2Q6UXV1 221 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 AKAP14Q86UN6 197 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 TCTE3Q8IZS6 198 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 ATG5Q9H1Y0 275 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 HIGD1AQ9Y241 93 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 KNTC1P50748 2209 aa0.38□□□□□ -2.35
PTPN4-212ENST00000488896 ATG2AQ2TAZ0 1938 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 TRAV36DV7A0A075B6V5 113 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 A0A0D9SG42 100 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 A0A1B0GW64 132 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 CD3DP04234 171 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 EVI2AP22794 236 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 FXYD3Q14802 87 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 CCDC153Q494R4 210 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 CLLU1Q5K131 121 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 GLYATL3Q5SZD4 288 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 NAT14Q8WUY8 206 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 C19orf12Q9NSK7 152 aa0.37□□□□□ -2.35
PTPN4-212ENST00000488896 JPT1Q9UK76 154 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms