RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 TRAV8-1A0A0A6YYK1 113 aa7.51□□□□□ -1.21
SKA1-204ENST00000488454 TRAV34A0A0B4J273 112 aa7.51□□□□□ -1.21
SKA1-204ENST00000488454 RNASE4P34096 147 aaKnown RBP7.51□□□□□ -1.21
SKA1-204ENST00000488454 FLI1Q01543 452 aaPredicted RBP7.51□□□□□ -1.21
SKA1-204ENST00000488454 Q8TAT8 98 aa7.51□□□□□ -1.21
SKA1-204ENST00000488454 FMC1Q96HJ9 113 aa7.51□□□□□ -1.21
SKA1-204ENST00000488454 LINC00479Q96M42 142 aa7.51□□□□□ -1.21
SKA1-204ENST00000488454 RARRES2Q99969 163 aa7.51□□□□□ -1.21
SKA1-204ENST00000488454 TREM1Q9NP99 234 aa7.51□□□□□ -1.21
SKA1-204ENST00000488454 MEGF8Q7Z7M0 2845 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 LOC102723971A0A1B0GUV8 181 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 CRISP2P16562 243 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 IFITM2Q01629 132 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 TMEM183BQ1AE95 376 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 CSNK1G2-AS1Q8NCQ2 148 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 OR11H2Q8NH07 326 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 FAM19A4Q96LR4 140 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 FAM210AQ96ND0 272 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 LINC01587Q99440 93 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 C20orf144Q9BQM9 153 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 OVOL2Q9BRP0 275 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 NIPSNAP3BQ9BS92 247 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 RETNQ9HD89 108 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 MED9Q9NWA0 146 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 ZFP30Q9Y2G7 519 aa7.5□□□□□ -1.21
SKA1-204ENST00000488454 AGRNO00468 2067 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 TRAV12-3A0A0B4J271 114 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 C7orf71A4D174 169 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 CRXO43186 299 aaPredicted RBP7.49□□□□□ -1.21
SKA1-204ENST00000488454 PEA15Q15121 130 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 SMUG1Q53HV7 270 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 TOR2AQ5JU69 321 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 ZNF506Q5JVG8 444 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 GFI1BQ5VTD9 330 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 TMEM256Q8N2U0 113 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 ANAPC16Q96DE5 110 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 KLF12Q9Y4X4 402 aa7.49□□□□□ -1.21
SKA1-204ENST00000488454 TRBV6-1A0A0K0K1D8 114 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 SMIM9A6NGZ8 99 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 KLLNB2CW77 178 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 H7BYZ3 331 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 IGLV2-11P01706 119 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 HTN1P15515 57 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 TAS2R60P59551 318 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 CLLU1Q5K131 121 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 BAGE2Q86Y30 109 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 C1orf158Q8N1D5 194 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 ZFAND2AQ8N6M9 145 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 C2CD4CQ8TF44 421 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 C11orf52Q96A22 123 aa7.48□□□□□ -1.21
SKA1-204ENST00000488454 TRAV21A0A0B4J279 112 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 TMEM250H0YL14 139 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 MIFP14174 115 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 RPL35P42766 123 aaKnown RBP7.47□□□□□ -1.21
SKA1-204ENST00000488454 CEBPGP53567 150 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 BTN1A1Q13410 526 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 KIR3DS1Q14943 382 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 ZNF705AQ6ZN79 300 aaPredicted RBP7.47□□□□□ -1.21
SKA1-204ENST00000488454 Q86TA4 180 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 TVP23CQ96ET8 276 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 NEU1Q99519 415 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 PYGO2Q9BRQ0 406 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 U3KQK5 164 aa7.47□□□□□ -1.21
SKA1-204ENST00000488454 NDUFS6O75380 124 aaKnown RBP7.46□□□□□ -1.22
SKA1-204ENST00000488454 GCGP01275 180 aa7.46□□□□□ -1.22
SKA1-204ENST00000488454 LTAP01374 205 aa7.46□□□□□ -1.22
SKA1-204ENST00000488454 RRN3P1Q2M238 152 aa7.46□□□□□ -1.22
SKA1-204ENST00000488454 ZNF674Q2M3X9 581 aa7.46□□□□□ -1.22
SKA1-204ENST00000488454 TMEM183AQ8IXX5 376 aa7.46□□□□□ -1.22
SKA1-204ENST00000488454 C8orf49Q96NF6 230 aa7.46□□□□□ -1.22
SKA1-204ENST00000488454 SMDT1Q9H4I9 107 aa7.46□□□□□ -1.22
SKA1-204ENST00000488454 CBY3A6NI87 242 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 FABP5P3A8MUU1 101 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 ZNF705GA8MUZ8 300 aaPredicted RBP7.45□□□□□ -1.22
SKA1-204ENST00000488454 ZNF324O75467 553 aaPredicted RBP7.45□□□□□ -1.22
SKA1-204ENST00000488454 MED14OSP0DP75 135 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 GNG4P50150 75 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 Q6AWC8 147 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 FAM159AQ6UWV7 190 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 KRTAP9-9Q9BYP9 154 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 NAGKQ9UJ70 344 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 X6R8D5 127 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 DNAH9Q9NYC9 4486 aa7.45□□□□□ -1.22
SKA1-204ENST00000488454 IGHV1OR15-1A0A075B7D0 117 aa7.44□□□□□ -1.22
SKA1-204ENST00000488454 RAB19A4D1S5 217 aa7.44□□□□□ -1.22
SKA1-204ENST00000488454 TMEM189A5PLL7 270 aa7.44□□□□□ -1.22
SKA1-204ENST00000488454 PFN1P07737 140 aaKnown RBP7.44□□□□□ -1.22
SKA1-204ENST00000488454 SRP19P09132 144 aaKnown RBP7.44□□□□□ -1.22
SKA1-204ENST00000488454 RBMY1A1P0DJD3 496 aaKnown RBP7.44□□□□□ -1.22
SKA1-204ENST00000488454 RBMY1CP0DJD4 496 aa7.44□□□□□ -1.22
SKA1-204ENST00000488454 MGST1P10620 155 aaKnown RBP7.44□□□□□ -1.22
SKA1-204ENST00000488454 RBMY1FQ15415 496 aaKnown RBP7.44□□□□□ -1.22
SKA1-204ENST00000488454 CENPWQ5EE01 88 aa7.44□□□□□ -1.22
SKA1-204ENST00000488454 PRR9Q5T870 116 aa7.44□□□□□ -1.22
SKA1-204ENST00000488454 EIF4E3Q8N5X7 224 aaKnown RBP7.44□□□□□ -1.22
SKA1-204ENST00000488454 NHLRC2Q8NBF2 726 aa7.44□□□□□ -1.22
SKA1-204ENST00000488454 DERL1Q9BUN8 251 aa7.44□□□□□ -1.22
SKA1-204ENST00000488454 PARLQ9H300 379 aa7.44□□□□□ -1.22
SKA1-204ENST00000488454 BIN3Q9NQY0 253 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms