RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ASB16-AS1Q495Z4 193 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 XAF1Q6GPH4 301 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 TMEM229BQ8NBD8 167 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 MORN4Q8NDC4 146 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 GRPEL2Q8TAA5 225 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 THEM6Q8WUY1 208 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 CCDC32Q9BV29 185 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 ROCK1Q13464 1354 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 FER1L6Q2WGJ9 1857 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 KCPQ6ZWJ8 1503 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 NBDYA0A0U1RRE5 68 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 A0A1W2PPB8 328 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 KIR3DP1A8MWS1 328 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 M0QZK8 103 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 GYPBP06028 91 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 FABP1P07148 127 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 SAA1P0DJI8 122 aaPredicted RBP0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 CRYGSP22914 178 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 RPS3P23396 243 aaKnown RBP eCLIP0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 FXYD3Q14802 87 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 ZNF56Q15929 161 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 TCTEX1D1Q8N7M0 179 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 CBLN4Q9NTU7 201 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 SMPXQ9UHP9 88 aa0.15□□□□□ -2.39
R3HDM1-219ENST00000488035 BCORL1Q5H9F3 1711 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 LOC107984640A0A0U1RRK4 108 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 CDC42EP2O14613 210 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 IGKCP01834 107 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 BLCAPP62952 87 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 C10orf99Q6UWK7 81 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 OR51A4Q8NGJ6 313 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 LXNQ9BS40 222 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 MRPL36Q9P0J6 103 aaKnown RBP0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 ATPIF1Q9UII2 106 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 MPC1Q9Y5U8 109 aa0.14□□□□□ -2.39
R3HDM1-219ENST00000488035 FSIP2Q5CZC0 6907 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 ATG2AQ2TAZ0 1938 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 BDP1A6H8Y1 2624 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 TRBV7-6A0A0J9YX20 115 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 ARL5CA6NH57 179 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 BBIP1A8MTZ0 92 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 CD3DP04234 171 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 EVI2AP22794 236 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 FXYD6P3P58550 94 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 C3orf62Q6ZUJ4 267 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 C5orf56Q8N8D9 126 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 TSKUQ8WUA8 353 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 BRK1Q8WUW1 75 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 AP1S3Q96PC3 154 aa0.13□□□□□ -2.39
R3HDM1-219ENST00000488035 ABCA1O95477 2261 aa0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 PBRM1Q86U86 1689 aa0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 LOC107986453A0A1B0GWG9 222 aa0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 E7EQ34 232 aa0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 EDF1O60869 148 aaKnown RBP0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 GTF2A1P52655 376 aaPredicted RBP0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 RPL37P61927 97 aaKnown RBP0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 LYPD5Q6UWN5 251 aa0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 DEFB132Q7Z7B7 95 aa0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 CCDC115Q96NT0 180 aa0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 MYH1P12882 1939 aa0.12□□□□□ -2.39
R3HDM1-219ENST00000488035 ESPL1Q14674 2120 aa0.11□□□□□ -2.39
R3HDM1-219ENST00000488035 IGF2P01344 180 aa0.11□□□□□ -2.39
R3HDM1-219ENST00000488035 IL7P13232 177 aa0.11□□□□□ -2.39
R3HDM1-219ENST00000488035 S100A5P33763 92 aa0.11□□□□□ -2.39
R3HDM1-219ENST00000488035 DNAJB13P59910 316 aa0.11□□□□□ -2.39
R3HDM1-219ENST00000488035 IQCJQ1A5X6 159 aa0.11□□□□□ -2.39
R3HDM1-219ENST00000488035 NAT14Q8WUY8 206 aa0.11□□□□□ -2.39
R3HDM1-219ENST00000488035 MRPL35Q9NZE8 188 aaKnown RBP0.11□□□□□ -2.39
R3HDM1-219ENST00000488035 ZCCHC11Q5TAX3 1644 aaKnown RBP0.11□□□□□ -2.39
R3HDM1-219ENST00000488035 A0A1B0GV72 72 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 TMEM30CPA0ZSE6 113 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 TMEM189A5PLL7 270 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 PRORSD1PA6NEY8 169 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 PFDN1O60925 122 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 FAM107AO95990 144 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 HBDP02042 147 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 RPL22P35268 128 aaKnown RBP0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 TMEM128Q5BJH2 165 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 OR8J3Q8NGG0 315 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 AFDNP55196 1824 aaKnown RBP0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 A2MP01023 1474 aa0.1□□□□□ -2.39
R3HDM1-219ENST00000488035 IFITM5A6NNB3 132 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 HIGD1CA8MV81 97 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 FXYD1O00168 92 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 PGRMC1O00264 195 aaKnown RBP0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 TPST1O60507 370 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 IFNA21P01568 189 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 SLC25A5P05141 298 aaKnown RBP0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 SRP9P49458 86 aaKnown RBP0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 SPINK13Q1W4C9 94 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 CCSMST1Q4G0I0 132 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 OR9Q1Q8NGQ5 310 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 OTOSQ8NHW6 89 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 SMIM7Q9BQ49 75 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 CENPHQ9H3R5 247 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 C19orf12Q9NSK7 152 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 V9GYQ6 96 aa0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 ABCA4P78363 2273 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms