RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 NRGNQ92686 78 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 HLA-DMBP28068 263 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 TMEM14BQ9NUH8 114 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 GREB1Q4ZG55 1949 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 WIPF3A6NGB9 483 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 VPREB3Q9UKI3 123 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 LY96Q9Y6Y9 160 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 FAM231BA6NCW3 169 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 DEFB113Q30KQ7 82 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 TRAV1-1A0A0B4J248 108 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 NPBQ8NG41 125 aa12.18□□□□□ -0.46
PKD1-220ENST00000487932 TCF20Q9UGU0 1960 aaKnown RBP12.17□□□□□ -0.46
PKD1-220ENST00000487932 TRAV4A0A0B4J268 109 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 HOXB4P17483 251 aaPredicted RBP12.17□□□□□ -0.46
PKD1-220ENST00000487932 FREM3P0C091 2139 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 ABCA1O95477 2261 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 C17orf58Q2M2W7 97 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 TRBV6-6A0A0A6YYG2 114 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 LOXP28300 417 aaPredicted RBP12.17□□□□□ -0.46
PKD1-220ENST00000487932 C14orf132Q9NPU4 83 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 LRCOL1A6NCL2 159 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 ELANEP08246 267 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 RBM3P98179 157 aaKnown RBP12.17□□□□□ -0.46
PKD1-220ENST00000487932 C15orf53Q8NAA6 179 aa12.17□□□□□ -0.46
PKD1-220ENST00000487932 COLCA2A8K830 154 aa12.16□□□□□ -0.46
PKD1-220ENST00000487932 H3BRN7 92 aa12.16□□□□□ -0.46
PKD1-220ENST00000487932 GRNP28799 593 aaKnown RBP12.16□□□□□ -0.46
PKD1-220ENST00000487932 NYNRINQ9P2P1 1898 aaKnown RBP12.16□□□□□ -0.46
PKD1-220ENST00000487932 CNOT1A5YKK6 2376 aaKnown RBP12.16□□□□□ -0.46
PKD1-220ENST00000487932 WFDC9Q8NEX5 89 aa12.16□□□□□ -0.46
PKD1-220ENST00000487932 PRR25Q96S07 402 aa12.16□□□□□ -0.46
PKD1-220ENST00000487932 IGLV3-9A0A075B6K5 115 aa12.16□□□□□ -0.46
PKD1-220ENST00000487932 CT83Q5H943 113 aa12.16□□□□□ -0.46
PKD1-220ENST00000487932 UTF1Q5T230 341 aa12.16□□□□□ -0.46
PKD1-220ENST00000487932 NCR3O14931 201 aa12.15□□□□□ -0.46
PKD1-220ENST00000487932 IGLL5B9A064 214 aa12.15□□□□□ -0.46
PKD1-220ENST00000487932 SPART-AS1P0CW21 52 aa12.15□□□□□ -0.46
PKD1-220ENST00000487932 C8orf31Q8N9H6 132 aa12.15□□□□□ -0.46
PKD1-220ENST00000487932 CRYBA4P53673 196 aa12.15□□□□□ -0.47
PKD1-220ENST00000487932 FOXI2Q6ZQN5 318 aa12.15□□□□□ -0.47
PKD1-220ENST00000487932 Q6ZR03 302 aa12.15□□□□□ -0.47
PKD1-220ENST00000487932 PRSS33Q8NF86 280 aa12.15□□□□□ -0.47
PKD1-220ENST00000487932 CITED1Q99966 193 aa12.15□□□□□ -0.47
PKD1-220ENST00000487932 Q9H8V8 135 aa12.14□□□□□ -0.47
PKD1-220ENST00000487932 KIAA2026Q5HYC2 2103 aa12.14□□□□□ -0.47
PKD1-220ENST00000487932 K7ERJ3 54 aa12.14□□□□□ -0.47
PKD1-220ENST00000487932 MRPL35Q9NZE8 188 aaKnown RBP12.14□□□□□ -0.47
PKD1-220ENST00000487932 C17orf82Q86X59 251 aaPredicted RBP12.14□□□□□ -0.47
PKD1-220ENST00000487932 ZC2HC1AQ96GY0 325 aa12.14□□□□□ -0.47
PKD1-220ENST00000487932 FOXE3Q13461 319 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 SEM1Q6ZVN7 128 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 ZNF492Q9P255 531 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 PKIGQ9Y2B9 76 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 FNDC10F2Z333 226 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 NDUFB1O75438 58 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 C17orf77Q96MU5 243 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 KLK5Q9Y337 293 aaPredicted RBP12.13□□□□□ -0.47
PKD1-220ENST00000487932 UBE2V1Q13404 147 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 Q8TCH9 128 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 VOPP1Q96AW1 172 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 IGHV4-38-2P0DP08 117 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 COX7B2Q8TF08 81 aa12.13□□□□□ -0.47
PKD1-220ENST00000487932 A0A1B0GW64 132 aa12.12□□□□□ -0.47
PKD1-220ENST00000487932 NPYP01303 97 aa12.12□□□□□ -0.47
PKD1-220ENST00000487932 FUSP35637 526 aaKnown RBP eCLIP12.12□□□□□ -0.47
PKD1-220ENST00000487932 ORMDL1Q9P0S3 153 aa12.12□□□□□ -0.47
PKD1-220ENST00000487932 J3QQQ9 107 aa12.12□□□□□ -0.47
PKD1-220ENST00000487932 DLEU1O43261 78 aa12.12□□□□□ -0.47
PKD1-220ENST00000487932 MRPL23Q16540 153 aaKnown RBP12.12□□□□□ -0.47
PKD1-220ENST00000487932 TM2D2Q9BX73 214 aa12.12□□□□□ -0.47
PKD1-220ENST00000487932 RNF138Q8WVD3 245 aa12.12□□□□□ -0.47
PKD1-220ENST00000487932 PRO1854Q9UHT4 67 aa12.12□□□□□ -0.47
PKD1-220ENST00000487932 ARID2Q68CP9 1835 aa12.12□□□□□ -0.47
PKD1-220ENST00000487932 A8MWP6 167 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 AMTNQ6UX39 209 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 SIGLEC8Q9NYZ4 499 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 IGKV1-6A0A0C4DH72 117 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 ATP5G1P05496 136 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 SLC25A29Q8N8R3 303 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 ATP6V0E2Q8NHE4 81 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 C18orf32Q8TCD1 76 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 TRBV20-1A0A075B6N2 111 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 IGHV4-30-2A0A087WSY4 118 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 DOCK9Q9BZ29 2069 aa12.11□□□□□ -0.47
PKD1-220ENST00000487932 QRFPP83859 136 aa12.1□□□□□ -0.47
PKD1-220ENST00000487932 WFDC11Q8NEX6 87 aa12.1□□□□□ -0.47
PKD1-220ENST00000487932 MRPL36Q9P0J6 103 aaKnown RBP12.1□□□□□ -0.47
PKD1-220ENST00000487932 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
PKD1-220ENST00000487932 CEND1Q8N111 149 aa12.1□□□□□ -0.47
PKD1-220ENST00000487932 IFITM1P13164 125 aa12.1□□□□□ -0.47
PKD1-220ENST00000487932 BAALC-AS2P0C853 105 aa12.1□□□□□ -0.47
PKD1-220ENST00000487932 SBF2Q86WG5 1849 aa12.1□□□□□ -0.47
PKD1-220ENST00000487932 IGHG2P01859 326 aa12.09□□□□□ -0.47
PKD1-220ENST00000487932 COX7A2LO14548 114 aa12.09□□□□□ -0.47
PKD1-220ENST00000487932 ZFP36P26651 326 aaKnown RBP12.09□□□□□ -0.47
PKD1-220ENST00000487932 ACACAQ13085 2346 aa12.09□□□□□ -0.47
PKD1-220ENST00000487932 WT1-ASQ06250 92 aa12.09□□□□□ -0.47
PKD1-220ENST00000487932 HIST2H2BCQ6DN03 193 aa12.09□□□□□ -0.47
PKD1-220ENST00000487932 DYNAPQ8N1N2 210 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms