RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 CRIP1P50238 77 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 FOXA3P55318 350 aaPredicted RBP4.62□□□□□ -1.67
VAMP3-203ENST00000487194 CMC4P56277 68 aaPredicted RBP4.62□□□□□ -1.67
VAMP3-203ENST00000487194 TCL1AP56279 114 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 PSMG4Q5JS54 123 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 WDR73Q6P4I2 378 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 FOXI2Q6ZQN5 318 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 TMEM61Q8N0U2 210 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.62□□□□□ -1.67
VAMP3-203ENST00000487194 NUP35Q8NFH5 326 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 OR2K2Q8NGT1 345 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 ODF3Q96PU9 254 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 NEU1Q99519 415 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 GPR61Q9BZJ8 451 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 FBN1P35555 2871 aaKnown RBP4.62□□□□□ -1.67
VAMP3-203ENST00000487194 JMJD1CQ15652 2540 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 TRAV21A0A0B4J279 112 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 A0A0J9YX75 114 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 A0A1B0GW15 77 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 HIGD1CA8MV81 97 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 SAP30O75446 220 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 TRGC2P03986 189 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 S100A8P05109 93 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 GPX1P07203 203 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 PRB4P10163 310 aaPredicted RBP4.61□□□□□ -1.67
VAMP3-203ENST00000487194 TSPOP30536 169 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 KRTAP10-3P60369 221 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 LINC01559Q495D7 138 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 CD300EQ496F6 205 aaPredicted RBP4.61□□□□□ -1.67
VAMP3-203ENST00000487194 HIST2H2BDQ6DRA6 164 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 BORCS7Q96B45 105 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 FAM19A4Q96LR4 140 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 GNB1LQ9BYB4 327 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 TRAPPC1Q9Y5R8 145 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 SELENOKQ9Y6D0 94 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 STAB1Q9NY15 2570 aa4.61□□□□□ -1.67
VAMP3-203ENST00000487194 SNURFLB1AK76 121 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 F6UB75 175 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 ORM1P02763 201 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 S100A6P06703 90 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 ZNF705DP0CH99 300 aaPredicted RBP4.6□□□□□ -1.67
VAMP3-203ENST00000487194 ZNF705BP0CI00 300 aaPredicted RBP4.6□□□□□ -1.67
VAMP3-203ENST00000487194 ZNF80P51504 273 aaPredicted RBP4.6□□□□□ -1.67
VAMP3-203ENST00000487194 RIGQ13278 110 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 ACTL10Q5JWF8 245 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 MRPL54Q6P161 138 aaKnown RBP4.6□□□□□ -1.67
VAMP3-203ENST00000487194 APRG1Q8IVJ8 170 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 ZFAND2AQ8N6M9 145 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 GTSF1Q8WW33 167 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 FRZBQ92765 325 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 PGLYRP4Q96LB8 373 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 CITED1Q99966 193 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 NOTCH1P46531 2555 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 WNK1Q9H4A3 2382 aa4.6□□□□□ -1.67
VAMP3-203ENST00000487194 TMSB15BA0A087X1C1 80 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 A0A1B0GUT8 65 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 KLLNB2CW77 178 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 F2Z2F3 143 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 SPINK4O60575 86 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 IGLV1-51P01701 117 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 HLA-DQA1P01909 254 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 TRGC1P0CF51 173 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 HLA-DRB4P13762 266 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 CD33P20138 364 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 INSL3P51460 131 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 DEFB131AP59861 70 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 DEFB1P60022 68 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 RAB4BP61018 213 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 HBBP68871 147 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 FABP9Q0Z7S8 132 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 TMEM136Q6ZRR5 245 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 ZFP82Q8N141 532 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 LINC00482Q8N8I6 264 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 FER1L6-AS1Q8NA97 138 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 KCNS1Q96KK3 526 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 MRPL18Q9H0U6 180 aaKnown RBP4.59□□□□□ -1.67
VAMP3-203ENST00000487194 MAP6D1Q9H9H5 199 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 ZNF256Q9Y2P7 627 aaPredicted RBP4.59□□□□□ -1.67
VAMP3-203ENST00000487194 HLA-DRB4X5D2U9 266 aa4.59□□□□□ -1.67
VAMP3-203ENST00000487194 A0A1B0GXF2 115 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 C7orf71A4D174 169 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 A8MTW9 85 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 OR11H12B2RN74 326 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 H3BMM0 161 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 PHOX2AO14813 284 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST1H2BKO60814 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 APCSP02743 223 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST1H2BJP06899 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 IGLC6P0CF74 106 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 GZMBP10144 247 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST1H2BOP23527 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST1H2BBP33778 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 RNASE4P34096 147 aaKnown RBP4.58□□□□□ -1.68
VAMP3-203ENST00000487194 CTRLP40313 264 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 CDKN1BP46527 198 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 CAMPP49913 170 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST1H2BDP58876 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST1H2BCP62807 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST2H2BEQ16778 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms