RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 DYNAPQ8N1N2 210 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 C11orf44Q8N8P7 122 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 NPBQ8NG41 125 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 OR11H6Q8NGC7 330 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 FAM110DQ8TAY7 271 aaPredicted RBP7□□□□□ -1.29
COL12A1-208ENST00000486533 RNF125Q96EQ8 232 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 FBXL15Q9H469 300 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 OR4C46A6NHA9 309 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 C2orf70A6NJV1 201 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 LY6LH3BQJ8 138 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 NDUFA3O95167 84 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 IGHV3-48P01763 117 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 GDF5OSQ5U4N7 250 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 OR10AG1Q8NH19 301 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 PIFOQ8TCI5 191 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 PSG8Q9UQ74 426 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 HILPDAQ9Y5L2 63 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 TNCP24821 2201 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 IGHV1-24A0A0C4DH33 117 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 WI2-2373I1.2A0A1W2PRP0 233 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 BMI1P35226 326 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 LDLRAD2Q5SZI1 272 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 MINOS1Q5TGZ0 78 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 HIST2H2BDQ6DRA6 164 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 SLC25A34Q6PIV7 304 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 DPF1Q92782 380 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 AP5S1Q9NUS5 200 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 MINOS1-NBL1R4GNA1 71 aa6.99□□□□□ -1.29
COL12A1-208ENST00000486533 SH2D7A6NKC9 451 aaPredicted RBP6.98□□□□□ -1.29
COL12A1-208ENST00000486533 IL4P05112 153 aa6.98□□□□□ -1.29
COL12A1-208ENST00000486533 EBLN2Q6P2I7 272 aa6.98□□□□□ -1.29
COL12A1-208ENST00000486533 GTSF1Q8WW33 167 aa6.98□□□□□ -1.29
COL12A1-208ENST00000486533 CMYA5Q8N3K9 4069 aa6.98□□□□□ -1.29
COL12A1-208ENST00000486533 TMEM189A5PLL7 270 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 A6NDX4 124 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 K7EIM0 57 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 IGKV1-17P01599 117 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 CNTFRP26992 372 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 C5orf64Q2M2E5 130 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 SIGLEC15Q6ZMC9 328 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 ZNF493Q6ZR52 646 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 COX8CQ7Z4L0 72 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 SPATA12Q7Z6I5 190 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 PRSS3P2Q8NHM4 247 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 ARPC1AQ92747 370 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 RITA1Q96K30 269 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 ZNF702PQ9H963 129 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 NOTCH3Q9UM47 2321 aa6.97□□□□□ -1.29
COL12A1-208ENST00000486533 IGHV3-21A0A0B4J1V1 117 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 IGLV2-11P01706 119 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 IGLL1P15814 213 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 FCGR2BP31994 310 aaPredicted RBP6.96□□□□□ -1.29
COL12A1-208ENST00000486533 HIST1H1AQ02539 215 aaPredicted RBP6.96□□□□□ -1.29
COL12A1-208ENST00000486533 NSUN5P1Q3KNT7 163 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 ZNF562Q6V9R5 426 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 EXOC3-AS1Q8N2X6 119 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 TTC9CQ8N5M4 171 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 ZNF491Q8N8L2 437 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 OR1N2Q8NGR9 330 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 CFHR4Q92496 578 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 ZNF414Q96IQ9 312 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 RABAC1Q9UI14 185 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 COX11Q9Y6N1 276 aa6.96□□□□□ -1.29
COL12A1-208ENST00000486533 IGLV11-55A0A075B6I3 123 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 NDUFB8O95169 186 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 APOHP02749 345 aaPredicted RBP6.95□□□□□ -1.3
COL12A1-208ENST00000486533 CD24P25063 80 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 HINT1P49773 126 aaPredicted RBP6.95□□□□□ -1.3
COL12A1-208ENST00000486533 PTTG1IPP53801 180 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 BLCAPP62952 87 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 HES1Q14469 280 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 LEMD1Q68G75 181 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 LCN12Q6JVE5 192 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 ATOH7Q8N100 152 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 ORMDL3Q8N138 153 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 Q8N2B8 174 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 ZC2HC1AQ96GY0 325 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 SGK494Q96LW2 274 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 CLEC5AQ9NY25 188 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 C21orf62Q9NYP8 219 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 PLXNB1O43157 2135 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 PPBPP02775 128 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 APELAP0DMC3 54 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 CD28P10747 220 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 RELQ04864 619 aaPredicted RBP6.95□□□□□ -1.3
COL12A1-208ENST00000486533 TMEM95Q3KNT9 176 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 LINC01545Q5VT33 79 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 LINC00322Q6ZN03 302 aaPredicted RBP6.95□□□□□ -1.3
COL12A1-208ENST00000486533 STPG4Q8N801 248 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 SLC50A1Q9BRV3 221 aa6.95□□□□□ -1.3
COL12A1-208ENST00000486533 TRAV8-1A0A0A6YYK1 113 aa6.94□□□□□ -1.3
COL12A1-208ENST00000486533 G3V4G9 280 aa6.94□□□□□ -1.3
COL12A1-208ENST00000486533 H3BTX0 84 aa6.94□□□□□ -1.3
COL12A1-208ENST00000486533 MRPS12O15235 138 aaKnown RBP6.94□□□□□ -1.3
COL12A1-208ENST00000486533 ARMS2P0C7Q2 107 aa6.94□□□□□ -1.3
COL12A1-208ENST00000486533 UBE2V1Q13404 147 aa6.94□□□□□ -1.3
COL12A1-208ENST00000486533 URB1-AS1Q96HZ7 61 aa6.94□□□□□ -1.3
COL12A1-208ENST00000486533 PRKDCP78527 4128 aaKnown RBP6.94□□□□□ -1.3
COL12A1-208ENST00000486533 RBAKDNA6NC62 111 aa6.93□□□□□ -1.3
COL12A1-208ENST00000486533 HBDP02042 147 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms