RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 KCNIP3Q9Y2W7 256 aa9.51□□□□□ -0.89
U2AF1-211ENST00000486519 STRAPQ9Y3F4 350 aaKnown RBP9.51□□□□□ -0.89
U2AF1-211ENST00000486519 OR10J4P0C629 311 aa9.5□□□□□ -0.89
U2AF1-211ENST00000486519 RPP30P78346 268 aaKnown RBP9.5□□□□□ -0.89
U2AF1-211ENST00000486519 NEDD8Q15843 81 aa9.5□□□□□ -0.89
U2AF1-211ENST00000486519 C14orf177Q52M58 125 aa9.5□□□□□ -0.89
U2AF1-211ENST00000486519 CIB3Q96Q77 187 aaPredicted RBP9.5□□□□□ -0.89
U2AF1-211ENST00000486519 TRBV6-4A0A1B0GX49 114 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 C5orf51A6NDU8 294 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 GAGE12JA6NER3 117 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 ANKRD65E5RJM6 399 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 MED6O75586 246 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 GAGE1Q13065 139 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 GAGE4Q13068 117 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 GAGE5Q13069 117 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 GUK1Q16774 197 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 GAGE13Q4V321 117 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 CFAP126Q5VTH2 177 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 C10orf113Q5VZT2 155 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 S100A7AQ86SG5 101 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 MGST2Q99735 147 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 NAGKQ9UJ70 344 aa9.49□□□□□ -0.89
U2AF1-211ENST00000486519 TRGV11A0A075B6L2 103 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 FAM25AB3EWG3 89 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 FAM25CB3EWG5 89 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 FAM25GB3EWG6 89 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 GOSR2O14653 212 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 PYYP10082 97 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 POLR2GP62487 172 aaKnown RBP eCLIP9.48□□□□□ -0.89
U2AF1-211ENST00000486519 TMEM78Q5T7P6 136 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 ZNF546Q86UE3 836 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 YIPF6Q96EC8 236 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 RNF24Q9Y225 148 aa9.48□□□□□ -0.89
U2AF1-211ENST00000486519 MUC21A0A0G2JKD1 596 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 METTL15P1P0C7V9 234 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 ARL16Q0P5N6 197 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 ZNF266Q14584 549 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 PXDC1Q5TGL8 231 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 DGAT2L7PQ6IED9 249 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 ENHOQ6UWT2 76 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 IZUMO2Q6UXV1 221 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 SPACA4Q8TDM5 124 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 C2orf50Q96LR7 162 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 NPVFQ9HCQ7 196 aa9.47□□□□□ -0.89
U2AF1-211ENST00000486519 CCDC59Q9P031 241 aaKnown RBP9.47□□□□□ -0.89
U2AF1-211ENST00000486519 DISC1C4P0D8 188 aa9.46□□□□□ -0.9
U2AF1-211ENST00000486519 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
U2AF1-211ENST00000486519 TYMSP04818 313 aa9.46□□□□□ -0.9
U2AF1-211ENST00000486519 ZNF138P52744 262 aa9.46□□□□□ -0.9
U2AF1-211ENST00000486519 Q6AWC8 147 aa9.46□□□□□ -0.9
U2AF1-211ENST00000486519 EXTL2Q9UBQ6 330 aa9.46□□□□□ -0.9
U2AF1-211ENST00000486519 SLC25A6P12236 298 aa9.45□□□□□ -0.9
U2AF1-211ENST00000486519 CAV2P51636 162 aa9.45□□□□□ -0.9
U2AF1-211ENST00000486519 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
U2AF1-211ENST00000486519 DPH3Q96FX2 82 aa9.45□□□□□ -0.9
U2AF1-211ENST00000486519 SAMD10Q9BYL1 202 aa9.45□□□□□ -0.9
U2AF1-211ENST00000486519 OR51M1Q9H341 326 aa9.45□□□□□ -0.9
U2AF1-211ENST00000486519 PSENENQ9NZ42 101 aa9.45□□□□□ -0.9
U2AF1-211ENST00000486519 PLAC8Q9NZF1 115 aa9.45□□□□□ -0.9
U2AF1-211ENST00000486519 PRELID1Q9Y255 219 aa9.45□□□□□ -0.9
U2AF1-211ENST00000486519 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
U2AF1-211ENST00000486519 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
U2AF1-211ENST00000486519 CYB561D1Q8N8Q1 229 aa9.44□□□□□ -0.9
U2AF1-211ENST00000486519 C1orf43Q9BWL3 253 aa9.44□□□□□ -0.9
U2AF1-211ENST00000486519 RABL2BQ9UNT1 228 aa9.44□□□□□ -0.9
U2AF1-211ENST00000486519 HIST1H1EP10412 219 aaKnown RBP9.43□□□□□ -0.9
U2AF1-211ENST00000486519 NCS1P62166 190 aa9.43□□□□□ -0.9
U2AF1-211ENST00000486519 SRPXP78539 464 aa9.43□□□□□ -0.9
U2AF1-211ENST00000486519 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
U2AF1-211ENST00000486519 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
U2AF1-211ENST00000486519 TMEM14EPQ6UXP3 125 aa9.43□□□□□ -0.9
U2AF1-211ENST00000486519 CLVS1Q8IUQ0 354 aaPredicted RBP9.43□□□□□ -0.9
U2AF1-211ENST00000486519 TIMM9Q9Y5J7 89 aa9.43□□□□□ -0.9
U2AF1-211ENST00000486519 URGCP-MRPS24S4R325 110 aa9.43□□□□□ -0.9
U2AF1-211ENST00000486519 DUXBA0A1W2PPF3 345 aa9.42□□□□□ -0.9
U2AF1-211ENST00000486519 SLPIP03973 132 aa9.42□□□□□ -0.9
U2AF1-211ENST00000486519 HOXB5P09067 269 aa9.42□□□□□ -0.9
U2AF1-211ENST00000486519 SRSF9Q13242 221 aaKnown RBP eCLIP9.42□□□□□ -0.9
U2AF1-211ENST00000486519 C7orf33Q8WU49 177 aa9.42□□□□□ -0.9
U2AF1-211ENST00000486519 GTSF1Q8WW33 167 aa9.42□□□□□ -0.9
U2AF1-211ENST00000486519 C20orf85Q9H1P6 137 aa9.42□□□□□ -0.9
U2AF1-211ENST00000486519 SSSCA1O60232 199 aa9.41□□□□□ -0.9
U2AF1-211ENST00000486519 AKAIN1P0CW23 69 aa9.41□□□□□ -0.9
U2AF1-211ENST00000486519 INPP1P49441 399 aa9.41□□□□□ -0.9
U2AF1-211ENST00000486519 RAB31Q13636 194 aa9.41□□□□□ -0.9
U2AF1-211ENST00000486519 ZNF876PQ49A33 203 aa9.41□□□□□ -0.9
U2AF1-211ENST00000486519 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
U2AF1-211ENST00000486519 PRRT1Q99946 306 aa9.41□□□□□ -0.9
U2AF1-211ENST00000486519 MGAT4CQ9UBM8 478 aa9.41□□□□□ -0.9
U2AF1-211ENST00000486519 FNDC10F2Z333 226 aa9.4□□□□□ -0.9
U2AF1-211ENST00000486519 ANXA3P12429 323 aa9.4□□□□□ -0.9
U2AF1-211ENST00000486519 ID3Q02535 119 aa9.4□□□□□ -0.9
U2AF1-211ENST00000486519 C14orf178Q8N769 122 aaPredicted RBP9.4□□□□□ -0.9
U2AF1-211ENST00000486519 RNF185Q96GF1 192 aa9.4□□□□□ -0.9
U2AF1-211ENST00000486519 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
U2AF1-211ENST00000486519 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
U2AF1-211ENST00000486519 TRBV7-9A0A0J9YWB2 115 aa9.39□□□□□ -0.91
U2AF1-211ENST00000486519 PGPEP1LA6NFU8 196 aa9.39□□□□□ -0.91
U2AF1-211ENST00000486519 MGST1P10620 155 aaKnown RBP9.39□□□□□ -0.91
U2AF1-211ENST00000486519 OR2T35Q8NGX2 323 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms