RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 DAZ4Q86SG3 579 aaKnown RBP4.16□□□□□ -1.74
SMC4-217ENST00000485867 SNX29P2Q8IUI4 249 aa4.16□□□□□ -1.74
SMC4-217ENST00000485867 MARCH1Q8TCQ1 289 aa4.16□□□□□ -1.74
SMC4-217ENST00000485867 RASL10AQ92737 203 aa4.16□□□□□ -1.74
SMC4-217ENST00000485867 RTBDNQ9BSG5 229 aaPredicted RBP4.16□□□□□ -1.74
SMC4-217ENST00000485867 VCXQ9H320 206 aa4.16□□□□□ -1.74
SMC4-217ENST00000485867 DAZ3Q9NR90 486 aaKnown RBP4.16□□□□□ -1.74
SMC4-217ENST00000485867 PAIP2BQ9ULR5 123 aaKnown RBP4.16□□□□□ -1.74
SMC4-217ENST00000485867 PXMP4Q9Y6I8 212 aa4.16□□□□□ -1.74
SMC4-217ENST00000485867 TRAV8-1A0A0A6YYK1 113 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 LOC100506127A0A0U1RQW1 187 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 CD3DP04234 171 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 PFN1P07737 140 aaKnown RBP4.15□□□□□ -1.75
SMC4-217ENST00000485867 GATA1P15976 413 aaPredicted RBP4.15□□□□□ -1.75
SMC4-217ENST00000485867 CRISP2P16562 243 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 ANXA7P20073 488 aaKnown RBP4.15□□□□□ -1.75
SMC4-217ENST00000485867 AQP4P55087 323 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 ERCC8Q13216 396 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 FAM122CQ6P4D5 195 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 PATE2Q6UY27 113 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 ZFAND2AQ8N6M9 145 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 NEXN-AS1Q8NBZ9 246 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 TERB2Q8NHR7 220 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 TMED6Q8WW62 240 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 RMI2Q96E14 147 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 SAT2Q96F10 170 aaPredicted RBP4.15□□□□□ -1.75
SMC4-217ENST00000485867 DNAJC30Q96LL9 226 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
SMC4-217ENST00000485867 C14orf166Q9Y224 244 aaKnown RBP4.15□□□□□ -1.75
SMC4-217ENST00000485867 IGKV2D-24A0A075B6R9 120 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 IGHV3-16A0A0C4DH30 117 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 GGTLC3B5MD39 225 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 H3BQ15 152 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 GPX1P07203 203 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 IGLC2P0DOY2 106 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 AKR1C4P17516 323 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 AMTP48728 403 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 SCGB2B2Q4G0G5 96 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 WDR73Q6P4I2 378 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 S100A7AQ86SG5 101 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 BPIFA4PQ86YQ2 179 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 OR4C5Q8NGB2 326 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 OR4D10Q8NGI6 311 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 ARL6Q9H0F7 186 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 GTSF1LQ9H1H1 148 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 ARV1Q9H2C2 271 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 BLOC1S6Q9UL45 172 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 RNF24Q9Y225 148 aa4.14□□□□□ -1.75
SMC4-217ENST00000485867 A0A0B4J2A0 478 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 SMCO3A2RU48 225 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 FABP12A6NFH5 140 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 M0R3E3 92 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 PITX3O75364 302 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 TBPP20226 339 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 SELENOTP62341 195 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 CIRBPQ14011 172 aaKnown RBP4.13□□□□□ -1.75
SMC4-217ENST00000485867 LYZL2Q7Z4W2 148 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 CROCCP3Q8IVE0 287 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 C9orf163Q8N9P6 203 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 MRPL53Q96EL3 112 aaKnown RBP4.13□□□□□ -1.75
SMC4-217ENST00000485867 LINC00477Q96M19 166 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 SPXQ9BT56 116 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 AGPAT4-IT1Q9H0P7 198 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 SHPKQ9UHJ6 478 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 KIF25-AS1Q9Y6Z4 181 aa4.13□□□□□ -1.75
SMC4-217ENST00000485867 PHOX2AO14813 284 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 NMBP08949 121 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 TGFBR1P36897 503 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 GABARAPL2P60520 117 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 RHOHQ15669 191 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 VWC2Q2TAL6 325 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 MUC21Q5SSG8 566 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 SDIM1Q6ZPB5 146 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 LINC00305Q7Z4B0 112 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 SLC25A29Q8N8R3 303 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 SRRQ9GZT4 340 aa4.12□□□□□ -1.75
SMC4-217ENST00000485867 SMIM31A0A1B0GVY4 71 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 H3BP45 60 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 K7EPK0 472 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 WRBO00258 174 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 ZNF253O75346 499 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 RAB3DO95716 219 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 APOA1P02647 267 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 OR10J4P0C629 311 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 RPP30P78346 268 aaKnown RBP4.11□□□□□ -1.75
SMC4-217ENST00000485867 SURF2Q15527 256 aaPredicted RBP4.11□□□□□ -1.75
SMC4-217ENST00000485867 TMEM183BQ1AE95 376 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 SPANXN5Q5MJ07 72 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 FAAP20Q6NZ36 180 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 ATRAIDQ6UW56 229 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 TMEM183AQ8IXX5 376 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 OR51S1Q8NGJ8 323 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 OR52I2Q8NH67 350 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 UBE2WQ96B02 151 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 ZC2HC1AQ96GY0 325 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 CIB3Q96Q77 187 aaPredicted RBP4.11□□□□□ -1.75
SMC4-217ENST00000485867 PRADC1Q9BSG0 188 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 OR51M1Q9H341 326 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms