RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 HES3Q5TGS1 186 aa3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 MRPL54Q6P161 138 aaKnown RBP3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 Q6ZR03 302 aa3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 CD177Q8N6Q3 437 aa3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 NEUROG1Q92886 237 aa3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 MGST2Q99735 147 aa3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 NAA38Q9BRA0 125 aaKnown RBP3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 C19orf24Q9BVV8 132 aa3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 MDFICQ9P1T7 246 aa3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 XCL2Q9UBD3 114 aa3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 KNTC1P50748 2209 aa3.05□□□□□ -1.92
PRPF38B-205ENST00000485810 GTF3C1Q12789 2109 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TRBV20OR9-2A0A075B6H5 130 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 IGLV3-9A0A075B6K5 115 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 IGKV1D-17A0A075B6S4 117 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 IZUMO1RA6ND01 250 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 CCDC179H3BU77 68 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 CGAP01215 116 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 IGHV3-13P01766 116 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 MT-ND6P03923 174 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 IGLC1P0CG04 106 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 ARL14EPLP0DKL9 152 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 CRYBB3P26998 211 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 PSMB8P28062 276 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 GCHFRP30047 84 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 ERVK-16P61578 105 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 HERVK_113P63121 156 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 PRR3P79522 188 aaKnown RBP3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 ERCC8Q13216 396 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TMEM183BQ1AE95 376 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 MUC21Q5SSG8 566 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 LCN12Q6JVE5 192 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TEX43Q6ZNM6 134 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 ZNF826PQ6ZT77 177 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TRPT1Q86TN4 253 aaKnown RBP3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 ZNF114Q8NC26 417 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 OR10G8Q8NGN5 311 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 OR9G1Q8NH87 305 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 SGMS2Q8NHU3 365 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TMEM190Q8WZ59 177 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 RAB37Q96AX2 223 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 ZNF71Q9NQZ8 489 aaPredicted RBP3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 OSTCQ9NRP0 149 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TMEM167BQ9NRX6 74 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TMEM14BQ9NUH8 114 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 IL36BQ9NZH7 164 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TRAPPC1Q9Y5R8 145 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 PTPRBP23467 1997 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 CACNA1DQ01668 2161 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 MED13Q9UHV7 2174 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 ESPL1Q14674 2120 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 DOCK7Q96N67 2140 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TRIOBPQ9H2D6 2365 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 ZDBF2Q9HCK1 2354 aa3.04□□□□□ -1.92
PRPF38B-205ENST00000485810 TECTAO75443 2155 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 IGHV3OR16-13A0A075B7E8 117 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 TRAV17A0A0B4J275 112 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 IGHV1-18A0A0C4DH31 117 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 MDFIC2A0A1B0GVS7 189 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 ZNF705GA8MUZ8 300 aaPredicted RBP3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 TRBV12-3P01733 135 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 SCGB1C2P0DMR2 95 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 PLA2G2AP14555 144 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 PRCDQ00LT1 54 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 C17orf58Q2M2W7 97 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 C2orf83Q53S99 150 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 FAM53AQ6NSI3 398 aaPredicted RBP3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 AMTNQ6UX39 209 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 C10orf126Q8N4M7 172 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 C11orf72Q8NBR9 251 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 ZNRF1Q8ND25 227 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 MPLKIPQ8TAP9 179 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 UBALD1Q8TB05 177 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 BRK1Q8WUW1 75 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 CHCHD10Q8WYQ3 142 aaPredicted RBP3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 FXYD5Q96DB9 178 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 CARD19Q96LW7 228 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 TMEM106BQ9NUM4 274 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 TP53TG3Q9ULZ0 132 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 MRPS16Q9Y3D3 137 aaKnown RBP3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 PYGO1Q9Y3Y4 419 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 SLC25A15Q9Y619 301 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 V9GYV3 84 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 GPR179Q6PRD1 2367 aa3.03□□□□□ -1.92
PRPF38B-205ENST00000485810 CHD3Q12873 2000 aaKnown RBP3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 IGLV5-45A0A087WSX0 123 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 SMIM26A0A096LP01 95 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 TRAV3A0A0B4J244 114 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 IGHV1-69DA0A0B4J2H0 117 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 TRBV7-6A0A0J9YX20 115 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 A0A0J9YXV3 536 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 DPRXA6NFQ7 191 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 OR2T8A6NH00 312 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 TMEM262E9PQX1 116 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 LY6LH3BQJ8 138 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 M0R1X1 148 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 FRMD6-AS1P0C7T7 363 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 LINC00869P0C866 280 aa3.02□□□□□ -1.93
PRPF38B-205ENST00000485810 FABP2P12104 132 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms