RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 TIMM23O14925 209 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 HOXA3O43365 443 aaPredicted RBP3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 PRSS1P07477 247 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 FXYD7P58549 80 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 LAGE3Q14657 143 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 C5orf64Q2M2E5 130 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 CCDC144NLQ6NUI1 221 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 GTSCR1Q86UQ5 136 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 DTX2Q86UW9 622 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 Q8N6K4 173 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 LY6G5BQ8NDX9 201 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 Q8TAT8 98 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 MRAP2Q96G30 205 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 SPAG8Q99932 426 aaPredicted RBP3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 SLC50A1Q9BRV3 221 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 C1QTNF4Q9BXJ3 329 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 TTTY13Q9BZ97 58 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 GTSF1LQ9H1H1 148 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 DYNLRB1Q9NP97 96 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 HIF1ANQ9NWT6 349 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 MRPL35Q9NZE8 188 aaKnown RBP3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 SMAD5-AS1Q9Y6J3 95 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 CACNA1DQ01668 2161 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 MED13Q9UHV7 2174 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 MYO15AQ9UKN7 3530 aa3.6□□□□□ -1.83
SMARCC1-206ENST00000485737 CFAP54Q96N23 3096 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 IGHV7-4-1A0A0J9YVY3 117 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 MYMXA0A1B0GTQ4 84 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 OOSP1A8MZH6 123 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 OR11H12B2RN74 326 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 B9A039 149 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 H3BMG7 143 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 GAS8-AS1O95177 125 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 CNIH1O95406 144 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 ORM1P02763 201 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 GYPEP15421 78 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 COX7A1P24310 79 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 UBE2D1P51668 147 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 TCTAP57738 103 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 SMAGPQ0VAQ4 97 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 KLRD1Q13241 179 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 WFDC2Q14508 124 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 DEFB109BQ30KR1 87 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 ORMDL2Q53FV1 153 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 LYRM7Q5U5X0 104 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 MORN3Q6PF18 240 aaPredicted RBP3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 DYNAPQ8N1N2 210 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 MTURNQ8N3F0 131 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 MAPKAPK5-AS1Q8N8E1 139 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 OR11H1Q8NG94 326 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 OR11H2Q8NH07 326 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 MYOZ3Q8TDC0 251 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 SMIM2Q9BVW6 85 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 MSRB1Q9NZV6 116 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 C11orf21Q9P2W6 132 aa3.59□□□□□ -1.83
SMARCC1-206ENST00000485737 WDFY3Q8IZQ1 3526 aa3.59□□□□□ -1.84
SMARCC1-206ENST00000485737 AHCTF1Q8WYP5 2266 aa3.59□□□□□ -1.84
SMARCC1-206ENST00000485737 TRAV40A0A0B4J280 105 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 IGKV3D-20A0A0C4DH25 116 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 CENPVL3A0A0U1RRI6 287 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 E7EQL1 145 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 H7C1H1 209 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 M0QXV9 152 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 M0R1W7 72 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 M0R381 172 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 TRGV3P03979 118 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 CTSGP08311 255 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 LGALS1P09382 135 aaKnown RBP3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 GATA1P15976 413 aaPredicted RBP3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 UBE2D3P61077 147 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 UBE2D2P62837 147 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 RPL32P62910 135 aaKnown RBP3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 NDPQ00604 133 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 ERCC8Q13216 396 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 EBI3Q14213 229 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 ETDBQ3ZM63 59 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 CFAP126Q5VTH2 177 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 SBSPONQ8IVN8 264 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 POM121L12Q8N7R1 296 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 NEXN-AS1Q8NBZ9 246 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 DLX4Q92988 240 aaPredicted RBP3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 TOMM6Q96B49 74 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 HIST1H4GQ99525 98 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 C20orf78Q9BR46 151 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 VCX2Q9H322 139 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 TMEM160Q9NX00 188 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 MRPL16Q9NX20 251 aaKnown RBP3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 DPM3Q9P2X0 92 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 LENEPQ9Y5L5 61 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 WDR87Q6ZQQ6 2873 aa3.58□□□□□ -1.84
SMARCC1-206ENST00000485737 EYSQ5T1H1 3165 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 TRAV8-2A0A0B4J237 113 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 LINC01549A6NIU2 74 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 PRAC2D3DTV9 90 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 BUB3O43684 328 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 NXPH4O95158 308 aa3.57□□□□□ -1.84
SMARCC1-206ENST00000485737 GOSR1O95249 250 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms