RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 SNHG12Q9BXW3 62 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 DAZ1Q9NQZ3 744 aaKnown RBP5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 PEF1Q9UBV8 284 aaKnown RBP5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 IGSF10Q6WRI0 2623 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 ACACBO00763 2458 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 IGHV3-49A0A0A0MS15 119 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 IGKV3D-20A0A0C4DH25 116 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 OR4C46A6NHA9 309 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 HSBP1L1C9JCN9 74 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 M0QZ24 198 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 EREGO14944 169 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 SMAD7O15105 426 aaKnown RBP5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 SNAI2O43623 268 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 TCF21O43680 179 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 FSHBP01225 129 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 TRBV12-3P01733 135 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 CSN3P07498 182 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 MED14OSP0DP75 135 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 PSMB8P28062 276 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 CKS2P33552 79 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 ID1P41134 155 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 NUTF2P61970 127 aaKnown RBP5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 DEFB112Q30KQ8 113 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 LINC01545Q5VT33 79 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 UNQ9165/PRO28630Q6UXU0 137 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 SMIM15Q7Z3B0 74 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 APRG1Q8IVJ8 170 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 DEFB125Q8N687 156 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 ZNF738Q8NE65 137 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 ZNF747Q9BV97 191 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 KLK15Q9H2R5 256 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 MS4A6AQ9H2W1 248 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 MAP1LC3AQ9H492 121 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 ST20Q9HBF5 79 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 SIGLEC8Q9NYZ4 499 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 SMPXQ9UHP9 88 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 UFC1Q9Y3C8 167 aa5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 MRPS16Q9Y3D3 137 aaKnown RBP5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 SPTAN1Q13813 2472 aaKnown RBP5.62□□□□□ -1.51
SHROOM3-206ENST00000484236 TRAV21A0A0B4J279 112 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 A0A1B0GV90 55 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 PRSS47A8MTI9 375 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 TGFAP01135 160 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 IGHV3-11P01762 117 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 HBDP02042 147 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 ELANEP08246 267 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 IFI27P40305 119 aaPredicted RBP5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 HNRNPA3P51991 378 aaKnown RBP5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 PSMG4Q5JS54 123 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 CFAP46Q8IYW2 2715 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 TEX29Q8N6K0 151 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 LINC00469Q8N7U9 141 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 DPF1Q92782 380 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 RNF185Q96GF1 192 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 C20orf173Q96LM9 149 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 FAM19A4Q96LR4 140 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 RHPN1-AS1Q9BWJ2 59 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 NXT2Q9NPJ8 142 aaKnown RBP5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 VPREB3Q9UKI3 123 aa5.61□□□□□ -1.51
SHROOM3-206ENST00000484236 USP9XQ93008 2570 aaPredicted RBP5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 IGHV4-59P01825 116 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 PRB4P10163 310 aaPredicted RBP5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 IGLL1P15814 213 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 SRSF1Q07955 248 aaKnown RBP eCLIP5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 DEFB113Q30KQ7 82 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 PRR31Q5SQ13 230 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 PRSS57Q6UWY2 283 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 Q6YL49 198 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 Q6ZN92 141 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 Q6ZS46 218 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 ZFAND2AQ8N6M9 145 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 OR8A1Q8NGG7 326 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 NRGNQ92686 78 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 BBC3Q96PG8 261 aaPredicted RBP5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 ODF3Q96PU9 254 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 C11orf21Q9P2W6 132 aa5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 PRRC2AP48634 2157 aaKnown RBP5.6□□□□□ -1.51
SHROOM3-206ENST00000484236 LOC389332A0A1B0GUA5 103 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 LGALS9O00182 355 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 NPYP01303 97 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 PRB1P04280 392 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 RPLP1P05386 114 aaKnown RBP5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 IGHV4-31P0DP07 118 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 TSPOP30536 169 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 LGALS9BQ3B8N2 356 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 TM4SF20Q53R12 229 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 LGALS9CQ6DKI2 356 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 LINC00173Q6ZV60 143 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 ATOH7Q8N100 152 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 RNF152Q8N8N0 203 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 MYOZ3Q8TDC0 251 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 MRAP2Q96G30 205 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 PMCHL2Q9BQD1 86 aa5.59□□□□□ -1.51
SHROOM3-206ENST00000484236 CR1P17927 2039 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 SPG11Q96JI7 2443 aa5.58□□□□□ -1.52
SHROOM3-206ENST00000484236 A0A096LNJ9 63 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms