RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 FOXA3P55318 350 aaPredicted RBP10.03□□□□□ -0.8
RXRB-205ENST00000483821 WDR73Q6P4I2 378 aa10.03□□□□□ -0.8
RXRB-205ENST00000483821 BORCS7Q96B45 105 aa10.03□□□□□ -0.8
RXRB-205ENST00000483821 C2CD3Q4AC94 2353 aa10.03□□□□□ -0.8
RXRB-205ENST00000483821 TRAV21A0A0B4J279 112 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 HIGD1CA8MV81 97 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 F6UB75 175 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 CA1P00915 261 aaPredicted RBP10.02□□□□□ -0.81
RXRB-205ENST00000483821 ORM1P02763 201 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
RXRB-205ENST00000483821 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
RXRB-205ENST00000483821 TCL1AP56279 114 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 DEFB131AP59861 70 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 ATP5L2Q7Z4Y8 100 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 LINC00482Q8N8I6 264 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 FAM19A4Q96LR4 140 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 NEU1Q99519 415 aa10.02□□□□□ -0.81
RXRB-205ENST00000483821 A0A1B0GW15 77 aa10.01□□□□□ -0.81
RXRB-205ENST00000483821 IGLV1-51P01701 117 aa10.01□□□□□ -0.81
RXRB-205ENST00000483821 MT-ND6P03923 174 aa10.01□□□□□ -0.81
RXRB-205ENST00000483821 S100A8P05109 93 aa10.01□□□□□ -0.81
RXRB-205ENST00000483821 LINC01559Q495D7 138 aa10.01□□□□□ -0.81
RXRB-205ENST00000483821 APRG1Q8IVJ8 170 aa10.01□□□□□ -0.81
RXRB-205ENST00000483821 ZFAND2AQ8N6M9 145 aa10.01□□□□□ -0.81
RXRB-205ENST00000483821 NUP35Q8NFH5 326 aa10.01□□□□□ -0.81
RXRB-205ENST00000483821 MCRIP2Q9BUT9 160 aaKnown RBP10.01□□□□□ -0.81
RXRB-205ENST00000483821 GNB1LQ9BYB4 327 aa10.01□□□□□ -0.81
RXRB-205ENST00000483821 ZNF80P51504 273 aaPredicted RBP10□□□□□ -0.81
RXRB-205ENST00000483821 RIGQ13278 110 aa10□□□□□ -0.81
RXRB-205ENST00000483821 FAM110AQ9BQ89 295 aa10□□□□□ -0.81
RXRB-205ENST00000483821 ZNF256Q9Y2P7 627 aaPredicted RBP10□□□□□ -0.81
RXRB-205ENST00000483821 SETXQ7Z333 2677 aaKnown RBP10□□□□□ -0.81
RXRB-205ENST00000483821 ANK3Q12955 4377 aaKnown RBP10□□□□□ -0.81
RXRB-205ENST00000483821 SETD2Q9BYW2 2564 aaPredicted RBP9.99□□□□□ -0.81
RXRB-205ENST00000483821 OR11H12B2RN74 326 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 F2Z2F3 143 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 HLA-DRB4P13762 266 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 CD33P20138 364 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 RNASE4P34096 147 aaKnown RBP9.99□□□□□ -0.81
RXRB-205ENST00000483821 C9orf66Q5T8R8 295 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 PGLYRP4Q96LB8 373 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 CLUHP3Q96NS8 147 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 ZNF747Q9BV97 191 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 MAP6D1Q9H9H5 199 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 TRAPPC1Q9Y5R8 145 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 HLA-DRB4X5D2U9 266 aa9.99□□□□□ -0.81
RXRB-205ENST00000483821 NF1P21359 2839 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 A0A1B0GUT8 65 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 KLLNB2CW77 178 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 HLA-DQA1P01909 254 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 TRGC2P03986 189 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 CDKN1BP46527 198 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 DEFB1P60022 68 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 KRTAP24-1Q3LI83 254 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 ACTL10Q5JWF8 245 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 GTSF1Q8WW33 167 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 TMEM158Q8WZ71 300 aa9.98□□□□□ -0.81
RXRB-205ENST00000483821 TMSB15BA0A087X1C1 80 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 C7orf71A4D174 169 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 A8MTW9 85 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 H3BMM0 161 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 SPINK4O60575 86 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 AMBPP02760 352 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 RAB4BP61018 213 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 HBBP68871 147 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 GDF5OSQ5U4N7 250 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 MRPL54Q6P161 138 aaKnown RBP9.97□□□□□ -0.81
RXRB-205ENST00000483821 SHISA2Q6UWI4 295 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 C3orf56Q8N813 242 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 FRZBQ92765 325 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 KCNS1Q96KK3 526 aa9.97□□□□□ -0.81
RXRB-205ENST00000483821 KNCNA6PVL3 124 aa9.96□□□□□ -0.82
RXRB-205ENST00000483821 S100A6P06703 90 aa9.96□□□□□ -0.82
RXRB-205ENST00000483821 GZMBP10144 247 aa9.96□□□□□ -0.82
RXRB-205ENST00000483821 BEAN1Q3B7T3 259 aa9.96□□□□□ -0.82
RXRB-205ENST00000483821 C12orf54Q6X4T0 127 aa9.96□□□□□ -0.82
RXRB-205ENST00000483821 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
RXRB-205ENST00000483821 J3KRW8 73 aa9.95□□□□□ -0.82
RXRB-205ENST00000483821 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
RXRB-205ENST00000483821 NUTF2P61970 127 aaKnown RBP9.95□□□□□ -0.82
RXRB-205ENST00000483821 FABP9Q0Z7S8 132 aa9.95□□□□□ -0.82
RXRB-205ENST00000483821 FAM159AQ6UWV7 190 aa9.95□□□□□ -0.82
RXRB-205ENST00000483821 STHQ8IWL8 128 aa9.95□□□□□ -0.82
RXRB-205ENST00000483821 TPPP3Q9BW30 176 aa9.95□□□□□ -0.82
RXRB-205ENST00000483821 JMJD1CQ15652 2540 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 IGKV3D-20A0A0C4DH25 116 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 A0A1B0GXF2 115 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 IGLC6P0CF74 106 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 CTRLP40313 264 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 ASIPP42127 132 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 ODF3L2Q3SX64 289 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 PRR9Q5T870 116 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 LYZL1Q6UWQ5 148 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 AMTNQ6UX39 209 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 TMEM136Q6ZRR5 245 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 WFDC9Q8NEX5 89 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 MRPL18Q9H0U6 180 aaKnown RBP9.94□□□□□ -0.82
RXRB-205ENST00000483821 NAGKQ9UJ70 344 aa9.94□□□□□ -0.82
RXRB-205ENST00000483821 GRIFINA4D1Z8 144 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms