RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 ALKBH7Q9BT30 221 aaPredicted RBP13.06□□□□□ -0.32
MRPL28-210ENST00000483764 NDFIP1Q9BT67 221 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 NDUFAF3Q9BU61 184 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 DAZ1Q9NQZ3 744 aaKnown RBP13.06□□□□□ -0.32
MRPL28-210ENST00000483764 UFC1Q9Y3C8 167 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 U3KQE9 123 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 KIR2DL5BA0A0G2JN68 375 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 KIR2DL5BA0A0G2JPC4 375 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 LGALS9O00182 355 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 BUB3O43684 328 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 APOHP02749 345 aaPredicted RBP13.05□□□□□ -0.32
MRPL28-210ENST00000483764 AMTP48728 403 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 SLURP1P55000 103 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 SLAQ13239 276 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 TEX43Q6ZNM6 134 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 KIR2DL5AQ8N109 375 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 CHCHD1Q96BP2 118 aaKnown RBP13.05□□□□□ -0.32
MRPL28-210ENST00000483764 MRPL53Q96EL3 112 aaKnown RBP13.05□□□□□ -0.32
MRPL28-210ENST00000483764 RAX2Q96IS3 184 aa13.05□□□□□ -0.32
MRPL28-210ENST00000483764 IGHV3-49A0A0A0MS15 119 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 A0A1B0GUT8 65 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 A0A1W2PS18 150 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 ADARB2-AS1A8MUL3 147 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 CCL24O00175 119 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 FRMD6-AS1P0C7T7 363 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 BMI1P35226 326 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 Q6ZWC4 215 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 NDUFA11Q86Y39 141 aa13.04□□□□□ -0.32
MRPL28-210ENST00000483764 IGHV3OR16-13A0A075B7E8 117 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 IGHV3-74A0A0B4J1X5 117 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 IGHV3-66A0A0C4DH42 116 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 ZNF705FA8MVS1 300 aaPredicted RBP13.03□□□□□ -0.32
MRPL28-210ENST00000483764 H3BTX0 84 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 CHEK1O14757 476 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 ZNF705DP0CH99 300 aaPredicted RBP13.03□□□□□ -0.32
MRPL28-210ENST00000483764 ZNF705BP0CI00 300 aaPredicted RBP13.03□□□□□ -0.32
MRPL28-210ENST00000483764 FHL3Q13643 280 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 NSUN5P1Q3KNT7 163 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 LINC00322Q6ZN03 302 aaPredicted RBP13.03□□□□□ -0.32
MRPL28-210ENST00000483764 GTSF1Q8WW33 167 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 C20orf144Q9BQM9 153 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 SNRPCP09234 159 aaKnown RBP13.03□□□□□ -0.32
MRPL28-210ENST00000483764 KIAA1644Q3SXP7 199 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 TCF24Q7RTU0 167 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 NRN1Q9NPD7 142 aa13.03□□□□□ -0.32
MRPL28-210ENST00000483764 HSBP1O75506 76 aa13.02□□□□□ -0.33
MRPL28-210ENST00000483764 CAMPP49913 170 aa13.02□□□□□ -0.33
MRPL28-210ENST00000483764 PGLYRP4Q96LB8 373 aa13.02□□□□□ -0.33
MRPL28-210ENST00000483764 SGK494Q96LW2 274 aa13.02□□□□□ -0.33
MRPL28-210ENST00000483764 SMPXQ9UHP9 88 aa13.02□□□□□ -0.33
MRPL28-210ENST00000483764 TRAV8-1A0A0A6YYK1 113 aa13.01□□□□□ -0.33
MRPL28-210ENST00000483764 TMEM213A2RRL7 107 aa13.01□□□□□ -0.33
MRPL28-210ENST00000483764 GDF5OSQ5U4N7 250 aa13.01□□□□□ -0.33
MRPL28-210ENST00000483764 DLX4Q92988 240 aaPredicted RBP13.01□□□□□ -0.33
MRPL28-210ENST00000483764 C14orf144Q96I85 54 aa13.01□□□□□ -0.33
MRPL28-210ENST00000483764 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
MRPL28-210ENST00000483764 RHPN1-AS1Q9BWJ2 59 aa13.01□□□□□ -0.33
MRPL28-210ENST00000483764 PRO1933Q9H354 126 aa13.01□□□□□ -0.33
MRPL28-210ENST00000483764 ATRQ13535 2644 aa13.01□□□□□ -0.33
MRPL28-210ENST00000483764 OR5AL1P0C617 328 aa13□□□□□ -0.33
MRPL28-210ENST00000483764 PMCHL1Q16048 86 aa13□□□□□ -0.33
MRPL28-210ENST00000483764 CITED1Q99966 193 aa13□□□□□ -0.33
MRPL28-210ENST00000483764 LOC102724200A0A096LPH7 203 aaPredicted RBP12.99□□□□□ -0.33
MRPL28-210ENST00000483764 EDN2P20800 178 aa12.99□□□□□ -0.33
MRPL28-210ENST00000483764 OR9G4Q8NGQ1 327 aa12.99□□□□□ -0.33
MRPL28-210ENST00000483764 GLMPQ8WWB7 406 aa12.99□□□□□ -0.33
MRPL28-210ENST00000483764 VAMP8Q9BV40 100 aa12.99□□□□□ -0.33
MRPL28-210ENST00000483764 PEMTQ9UBM1 199 aa12.99□□□□□ -0.33
MRPL28-210ENST00000483764 SMAD5-AS1Q9Y6J3 95 aa12.99□□□□□ -0.33
MRPL28-210ENST00000483764 C20orf202A1L168 122 aa12.98□□□□□ -0.33
MRPL28-210ENST00000483764 TMEM189A5PLL7 270 aa12.98□□□□□ -0.33
MRPL28-210ENST00000483764 C2orf70A6NJV1 201 aa12.98□□□□□ -0.33
MRPL28-210ENST00000483764 ZNF785A8K8V0 405 aa12.98□□□□□ -0.33
MRPL28-210ENST00000483764 ZNF493Q6ZR52 646 aa12.98□□□□□ -0.33
MRPL28-210ENST00000483764 PRR25Q96S07 402 aa12.98□□□□□ -0.33
MRPL28-210ENST00000483764 F2Z2F3 143 aa12.98□□□□□ -0.33
MRPL28-210ENST00000483764 RCHY1Q96PM5 261 aa12.98□□□□□ -0.33
MRPL28-210ENST00000483764 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
MRPL28-210ENST00000483764 M0R3E3 92 aa12.97□□□□□ -0.33
MRPL28-210ENST00000483764 KRTDAPP60985 99 aa12.97□□□□□ -0.33
MRPL28-210ENST00000483764 TMEM158Q8WZ71 300 aa12.97□□□□□ -0.33
MRPL28-210ENST00000483764 M0QZ24 198 aa12.96□□□□□ -0.33
MRPL28-210ENST00000483764 LCN12Q6JVE5 192 aa12.96□□□□□ -0.33
MRPL28-210ENST00000483764 NIT1Q86X76 327 aa12.96□□□□□ -0.33
MRPL28-210ENST00000483764 C2orf88Q9BSF0 95 aa12.96□□□□□ -0.33
MRPL28-210ENST00000483764 TENM1Q9UKZ4 2725 aa12.96□□□□□ -0.34
MRPL28-210ENST00000483764 FBN1P35555 2871 aaKnown RBP12.95□□□□□ -0.34
MRPL28-210ENST00000483764 M0R2Z0 102 aa12.95□□□□□ -0.34
MRPL28-210ENST00000483764 OVOL1O14753 267 aa12.95□□□□□ -0.34
MRPL28-210ENST00000483764 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
MRPL28-210ENST00000483764 ASCL2Q99929 193 aa12.95□□□□□ -0.34
MRPL28-210ENST00000483764 MIEN1Q9BRT3 115 aa12.95□□□□□ -0.34
MRPL28-210ENST00000483764 SH2D1AO60880 128 aa12.94□□□□□ -0.34
MRPL28-210ENST00000483764 CSN3P07498 182 aa12.94□□□□□ -0.34
MRPL28-210ENST00000483764 CTRLP40313 264 aa12.94□□□□□ -0.34
MRPL28-210ENST00000483764 RNASEKQ6P5S7 137 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms