RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 CLUHP3Q96NS8 147 aa12.06□□□□□ -0.48
RFTN1-209ENST00000483671 MCRIP2Q9BUT9 160 aaKnown RBP12.06□□□□□ -0.48
RFTN1-209ENST00000483671 FBN1P35555 2871 aaKnown RBP12.05□□□□□ -0.48
RFTN1-209ENST00000483671 SMIM27A0A1W2PRY6 76 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 FAM231BA6NCW3 169 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 HLA-DRB4P13762 266 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 ZNF80P51504 273 aaPredicted RBP12.05□□□□□ -0.48
RFTN1-209ENST00000483671 DEFB131AP59861 70 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 ODF3L2Q3SX64 289 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 C9orf66Q5T8R8 295 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 GDF5OSQ5U4N7 250 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 C12orf54Q6X4T0 127 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 C3orf56Q8N813 242 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 TSKUQ8WUA8 353 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 BTF3L4Q96K17 158 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 HLA-DRB4X5D2U9 266 aa12.05□□□□□ -0.48
RFTN1-209ENST00000483671 FABP5P3A8MUU1 101 aa12.04□□□□□ -0.48
RFTN1-209ENST00000483671 KLLNB2CW77 178 aa12.04□□□□□ -0.48
RFTN1-209ENST00000483671 WIPF1O43516 503 aa12.04□□□□□ -0.48
RFTN1-209ENST00000483671 SH2D1AO60880 128 aa12.04□□□□□ -0.48
RFTN1-209ENST00000483671 GFRA4Q9GZZ7 299 aa12.04□□□□□ -0.48
RFTN1-209ENST00000483671 URGCP-MRPS24S4R325 110 aa12.04□□□□□ -0.48
RFTN1-209ENST00000483671 A8MWL6 223 aa12.03□□□□□ -0.48
RFTN1-209ENST00000483671 H3BMM0 161 aa12.03□□□□□ -0.48
RFTN1-209ENST00000483671 LEPP41159 167 aa12.03□□□□□ -0.48
RFTN1-209ENST00000483671 AMTNQ6UX39 209 aa12.03□□□□□ -0.48
RFTN1-209ENST00000483671 LINC01559Q495D7 138 aa12.02□□□□□ -0.49
RFTN1-209ENST00000483671 Q6AWC8 147 aa12.02□□□□□ -0.49
RFTN1-209ENST00000483671 OR2D3Q8NGH3 330 aa12.02□□□□□ -0.49
RFTN1-209ENST00000483671 SORL1Q92673 2214 aa12.02□□□□□ -0.49
RFTN1-209ENST00000483671 TGIF2-C20orf24A0A0A6YYL0 155 aa12.01□□□□□ -0.49
RFTN1-209ENST00000483671 OR11H12B2RN74 326 aa12.01□□□□□ -0.49
RFTN1-209ENST00000483671 CA1P00915 261 aaPredicted RBP12.01□□□□□ -0.49
RFTN1-209ENST00000483671 TYMSP04818 313 aa12.01□□□□□ -0.49
RFTN1-209ENST00000483671 CXCL1P09341 107 aa12.01□□□□□ -0.49
RFTN1-209ENST00000483671 CD33P20138 364 aa12.01□□□□□ -0.49
RFTN1-209ENST00000483671 TSPOP30536 169 aa12.01□□□□□ -0.49
RFTN1-209ENST00000483671 FOXA3P55318 350 aaPredicted RBP12.01□□□□□ -0.49
RFTN1-209ENST00000483671 RPS20P60866 119 aaKnown RBP12.01□□□□□ -0.49
RFTN1-209ENST00000483671 PRR9Q5T870 116 aa12.01□□□□□ -0.49
RFTN1-209ENST00000483671 SPATA3Q8NHX4 192 aa12.01□□□□□ -0.49
RFTN1-209ENST00000483671 TRAV21A0A0B4J279 112 aa12□□□□□ -0.49
RFTN1-209ENST00000483671 RAB5AP20339 215 aa12□□□□□ -0.49
RFTN1-209ENST00000483671 FAM3BP58499 235 aaPredicted RBP12□□□□□ -0.49
RFTN1-209ENST00000483671 ACTL10Q5JWF8 245 aa12□□□□□ -0.49
RFTN1-209ENST00000483671 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
RFTN1-209ENST00000483671 FAM210BQ96KR6 192 aa12□□□□□ -0.49
RFTN1-209ENST00000483671 C19orf73Q9NVV2 129 aa12□□□□□ -0.49
RFTN1-209ENST00000483671 NAT8BQ9UHF3 227 aa12□□□□□ -0.49
RFTN1-209ENST00000483671 A0A1W2PPQ1 181 aa11.99□□□□□ -0.49
RFTN1-209ENST00000483671 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
RFTN1-209ENST00000483671 TMEM189A5PLL7 270 aa11.99□□□□□ -0.49
RFTN1-209ENST00000483671 KNCNA6PVL3 124 aa11.99□□□□□ -0.49
RFTN1-209ENST00000483671 GPX1P07203 203 aa11.99□□□□□ -0.49
RFTN1-209ENST00000483671 NEU1Q99519 415 aa11.99□□□□□ -0.49
RFTN1-209ENST00000483671 VWFP04275 2813 aa11.99□□□□□ -0.49
RFTN1-209ENST00000483671 CDKN1BP46527 198 aa11.98□□□□□ -0.49
RFTN1-209ENST00000483671 ZNF575Q86XF7 245 aa11.98□□□□□ -0.49
RFTN1-209ENST00000483671 GTSF1Q8WW33 167 aa11.98□□□□□ -0.49
RFTN1-209ENST00000483671 C7orf71A4D174 169 aa11.97□□□□□ -0.49
RFTN1-209ENST00000483671 HIGD1CA8MV81 97 aa11.97□□□□□ -0.49
RFTN1-209ENST00000483671 RPL19P84098 196 aaKnown RBP11.97□□□□□ -0.49
RFTN1-209ENST00000483671 ZNF124Q15973 351 aa11.97□□□□□ -0.49
RFTN1-209ENST00000483671 NUP35Q8NFH5 326 aa11.97□□□□□ -0.49
RFTN1-209ENST00000483671 C11orf21Q9P2W6 132 aa11.97□□□□□ -0.49
RFTN1-209ENST00000483671 IGKV3D-20A0A0C4DH25 116 aa11.96□□□□□ -0.49
RFTN1-209ENST00000483671 RBMY1BA6NDE4 496 aaKnown RBP11.96□□□□□ -0.49
RFTN1-209ENST00000483671 RBMY1EA6NEQ0 496 aaKnown RBP11.96□□□□□ -0.49
RFTN1-209ENST00000483671 RBMY1DP0C7P1 496 aaKnown RBP11.96□□□□□ -0.49
RFTN1-209ENST00000483671 RNASE4P34096 147 aaKnown RBP11.96□□□□□ -0.49
RFTN1-209ENST00000483671 TCL1AP56279 114 aa11.96□□□□□ -0.49
RFTN1-209ENST00000483671 RASL11AQ6T310 242 aa11.96□□□□□ -0.49
RFTN1-209ENST00000483671 ATP5L2Q7Z4Y8 100 aa11.96□□□□□ -0.49
RFTN1-209ENST00000483671 TRPT1Q86TN4 253 aaKnown RBP11.96□□□□□ -0.49
RFTN1-209ENST00000483671 SRD5A3Q9H8P0 318 aa11.96□□□□□ -0.49
RFTN1-209ENST00000483671 ZNF324O75467 553 aaPredicted RBP11.95□□□□□ -0.5
RFTN1-209ENST00000483671 ORM1P02763 201 aa11.95□□□□□ -0.5
RFTN1-209ENST00000483671 CD7P09564 240 aa11.95□□□□□ -0.5
RFTN1-209ENST00000483671 KIR3DS1Q14943 382 aa11.95□□□□□ -0.5
RFTN1-209ENST00000483671 COX19Q49B96 90 aa11.95□□□□□ -0.5
RFTN1-209ENST00000483671 GFI1BQ5VTD9 330 aa11.95□□□□□ -0.5
RFTN1-209ENST00000483671 AGRNO00468 2067 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 COL6A5A8TX70 2615 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 IGKV3-20P01619 116 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 AMBPP02760 352 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 IGLC6P0CF74 106 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 GZMBP10144 247 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 CTRLP40313 264 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 STHQ8IWL8 128 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 STAB1Q9NY15 2570 aa11.94□□□□□ -0.5
RFTN1-209ENST00000483671 M0R2Z0 102 aa11.93□□□□□ -0.5
RFTN1-209ENST00000483671 CRXO43186 299 aaPredicted RBP11.93□□□□□ -0.5
RFTN1-209ENST00000483671 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
RFTN1-209ENST00000483671 Q6ZQT7 251 aa11.93□□□□□ -0.5
RFTN1-209ENST00000483671 C20orf144Q9BQM9 153 aa11.93□□□□□ -0.5
RFTN1-209ENST00000483671 NOTCH3Q9UM47 2321 aa11.93□□□□□ -0.5
RFTN1-209ENST00000483671 A0A1B0GXF2 115 aa11.92□□□□□ -0.5
RFTN1-209ENST00000483671 J3KRW8 73 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms