RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 NDFIP1Q9BT67 221 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 SAV1Q9H4B6 383 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-226ENST00000483656 BIN3Q9NQY0 253 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 LENEPQ9Y5L5 61 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 SMIM27A0A1W2PRY6 76 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 KNCNA6PVL3 124 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 A8MTW9 85 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 CRISP2P16562 243 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 KIR3DS1Q14943 382 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 BEAN1Q3B7T3 259 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 FOXI2Q6ZQN5 318 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 Q6ZQT7 251 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 APRG1Q8IVJ8 170 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 WFDC9Q8NEX5 89 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 RPP21Q9H633 154 aaKnown RBP7.49□□□□□ -1.21
HDAC6-226ENST00000483656 C11orf21Q9P2W6 132 aa7.49□□□□□ -1.21
HDAC6-226ENST00000483656 TRBV24-1A0A075B6N3 115 aa7.48□□□□□ -1.21
HDAC6-226ENST00000483656 TRBV7-9A0A0J9YWB2 115 aa7.48□□□□□ -1.21
HDAC6-226ENST00000483656 RBMY1BA6NDE4 496 aaKnown RBP7.48□□□□□ -1.21
HDAC6-226ENST00000483656 RBMY1EA6NEQ0 496 aaKnown RBP7.48□□□□□ -1.21
HDAC6-226ENST00000483656 P01737 135 aa7.48□□□□□ -1.21
HDAC6-226ENST00000483656 RBMY1DP0C7P1 496 aaKnown RBP7.48□□□□□ -1.21
HDAC6-226ENST00000483656 RPL19P84098 196 aaKnown RBP7.48□□□□□ -1.21
HDAC6-226ENST00000483656 CT83Q5H943 113 aa7.48□□□□□ -1.21
HDAC6-226ENST00000483656 FAM162BQ5T6X4 162 aa7.48□□□□□ -1.21
HDAC6-226ENST00000483656 EBLN2Q6P2I7 272 aa7.48□□□□□ -1.21
HDAC6-226ENST00000483656 AMTNQ6UX39 209 aa7.48□□□□□ -1.21
HDAC6-226ENST00000483656 OR4B1Q8NGF8 309 aa7.48□□□□□ -1.21
HDAC6-226ENST00000483656 DAZAP1Q96EP5 407 aaKnown RBP7.48□□□□□ -1.21
HDAC6-226ENST00000483656 TRRAPQ9Y4A5 3859 aa7.48□□□□□ -1.21
HDAC6-226ENST00000483656 ANK2Q01484 3957 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 FABP5P3A8MUU1 101 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 KLLNB2CW77 178 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 H3BMM0 161 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 DUSP14O95147 198 aaKnown RBP7.47□□□□□ -1.21
HDAC6-226ENST00000483656 IGKV3-20P01619 116 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 GZMBP10144 247 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 HLA-DRB4P13762 266 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 TCL1AP56279 114 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 C12orf54Q6X4T0 127 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 OR2D3Q8NGH3 330 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 TSKUQ8WUA8 353 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 GTSF1Q8WW33 167 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 TMEM158Q8WZ71 300 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 ODF3Q96PU9 254 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 C19orf73Q9NVV2 129 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 HLA-DRB4X5D2U9 266 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 AGRNO00468 2067 aa7.47□□□□□ -1.21
HDAC6-226ENST00000483656 IGKV3D-20A0A0C4DH25 116 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 A0A1W2PPQ1 181 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 J3KRW8 73 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 CD7P09564 240 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 FRMD6-AS1P0C7T7 363 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 RAB5AP20339 215 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 S100PP25815 95 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 ACTL10Q5JWF8 245 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 C9orf66Q5T8R8 295 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 KCNIP4Q6PIL6 250 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 SHISA2Q6UWI4 295 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 C3orf56Q8N813 242 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 NUP35Q8NFH5 326 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 FAM210BQ96KR6 192 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 NEU1Q99519 415 aa7.46□□□□□ -1.22
HDAC6-226ENST00000483656 TRAV9-1A0A075B6T8 112 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 TMSB15BA0A087X1C1 80 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 TMEM189A5PLL7 270 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 A8MWL6 223 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 TYMSP04818 313 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 GPX1P07203 203 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 RNASE4P34096 147 aaKnown RBP7.45□□□□□ -1.22
HDAC6-226ENST00000483656 LEPP41159 167 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 INSL3P51460 131 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 LINC01559Q495D7 138 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 Q6AWC8 147 aa7.45□□□□□ -1.22
HDAC6-226ENST00000483656 FAM231BA6NCW3 169 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 HIGD1CA8MV81 97 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 OR11H12B2RN74 326 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 M0R2Z0 102 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 WIPF1O43516 503 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 ZNF324O75467 553 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-226ENST00000483656 ORM1P02763 201 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 IGLL1P15814 213 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 FOXA3P55318 350 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-226ENST00000483656 CMC4P56277 68 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-226ENST00000483656 GFI1BQ5VTD9 330 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 BTF3L4Q96K17 158 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 CLUHP3Q96NS8 147 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 FAM110AQ9BQ89 295 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 GFRA4Q9GZZ7 299 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 WFDC10AQ9H1F0 79 aa7.44□□□□□ -1.22
HDAC6-226ENST00000483656 DNAH3Q8TD57 4116 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 TRAV12-2A0A075B6T6 113 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 TRAV21A0A0B4J279 112 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 C7orf71A4D174 169 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 GRIFINA4D1Z8 144 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 CRXO43186 299 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-226ENST00000483656 SPINK4O60575 86 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 IGLC6P0CF74 106 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 FXYD7P58549 80 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 RPS20P60866 119 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms