RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 RAB1BQ9H0U4 201 aa8.57□□□□□ -1.04
RPGR-208ENST00000482855 SS18L2Q9UHA2 77 aa8.57□□□□□ -1.04
RPGR-208ENST00000482855 RALYQ9UKM9 306 aaKnown RBP8.57□□□□□ -1.04
RPGR-208ENST00000482855 S4R3C0 116 aa8.57□□□□□ -1.04
RPGR-208ENST00000482855 RPL7P18124 248 aaKnown RBP8.57□□□□□ -1.04
RPGR-208ENST00000482855 LYRM7Q5U5X0 104 aa8.57□□□□□ -1.04
RPGR-208ENST00000482855 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
RPGR-208ENST00000482855 TEN1Q86WV5 123 aa8.57□□□□□ -1.04
RPGR-208ENST00000482855 PTH2Q96A98 100 aa8.57□□□□□ -1.04
RPGR-208ENST00000482855 SRSF8Q9BRL6 282 aaKnown RBP8.57□□□□□ -1.04
RPGR-208ENST00000482855 TMEM178BH3BS89 294 aa8.56□□□□□ -1.04
RPGR-208ENST00000482855 LGALS1P09382 135 aaKnown RBP8.56□□□□□ -1.04
RPGR-208ENST00000482855 CCL17Q92583 94 aa8.56□□□□□ -1.04
RPGR-208ENST00000482855 CTSZQ9UBR2 303 aa8.56□□□□□ -1.04
RPGR-208ENST00000482855 RAXQ9Y2V3 346 aa8.56□□□□□ -1.04
RPGR-208ENST00000482855 ROS1P08922 2347 aa8.56□□□□□ -1.04
RPGR-208ENST00000482855 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
RPGR-208ENST00000482855 MBD3L4A6NDZ8 208 aaPredicted RBP8.56□□□□□ -1.04
RPGR-208ENST00000482855 MBD3L3A6NE82 208 aaPredicted RBP8.56□□□□□ -1.04
RPGR-208ENST00000482855 MBD3L5A6NJ08 208 aaPredicted RBP8.56□□□□□ -1.04
RPGR-208ENST00000482855 C17orf100A8MU93 164 aa8.56□□□□□ -1.04
RPGR-208ENST00000482855 TMEM78Q5T7P6 136 aa8.56□□□□□ -1.04
RPGR-208ENST00000482855 MBD3L2Q8NHZ7 208 aaPredicted RBP8.56□□□□□ -1.04
RPGR-208ENST00000482855 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 IGFL4Q6B9Z1 124 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 CARD19Q96LW7 228 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 TRGV3P03979 118 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 DLX1P56177 255 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 GAGE5Q13069 117 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 GAGE6Q13070 117 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 ZFAND6Q6FIF0 208 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 GFRALQ6UXV0 394 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 ZFP2Q6ZN57 461 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 NRACQ8N912 160 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 FDCSPQ8NFU4 85 aa8.55□□□□□ -1.04
RPGR-208ENST00000482855 TRAV26-2A0A0B4J265 109 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 TRAV17A0A0B4J275 112 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 HLA-DMBP28068 263 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 PRB3Q04118 309 aaPredicted RBP8.54□□□□□ -1.04
RPGR-208ENST00000482855 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
RPGR-208ENST00000482855 UFC1Q9Y3C8 167 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 DCHS1Q96JQ0 3298 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 ZNF688P0C7X2 276 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 UBE2D1P51668 147 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 UBE2D3P61077 147 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 UBE2D2P62837 147 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 TEX29Q8N6K0 151 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 PSMG3-AS1Q96PY0 264 aa8.54□□□□□ -1.04
RPGR-208ENST00000482855 ZNF815PA8K554 130 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 BUB1B-PAK6H3BSN5 160 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 IGLV1-47P01700 117 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 IL17RELQ6ZVW7 336 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 OR11H6Q8NGC7 330 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 ZGRF1Q86YA3 2104 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 A8MWV9 139 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 TNFRSF13BO14836 293 aaPredicted RBP8.53□□□□□ -1.04
RPGR-208ENST00000482855 MFAP4P55083 255 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 C22orf34Q6ZV56 151 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 NUP37Q8NFH4 326 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 PRADC1Q9BSG0 188 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 ZFHX4Q86UP3 3567 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 CFAP47Q6ZTR5 3102 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 TMEM262E9PQX1 116 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 ERCC8Q13216 396 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 CFHR4Q92496 578 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 SCGB3A1Q96QR1 104 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 KLK15Q9H2R5 256 aa8.53□□□□□ -1.04
RPGR-208ENST00000482855 RP1L1Q8IWN7 2480 aaPredicted RBP8.52□□□□□ -1.05
RPGR-208ENST00000482855 H3BVH4 76 aa8.52□□□□□ -1.05
RPGR-208ENST00000482855 IGHG4P01861 327 aa8.52□□□□□ -1.05
RPGR-208ENST00000482855 DYNAPQ8N1N2 210 aa8.52□□□□□ -1.05
RPGR-208ENST00000482855 VKORC1Q9BQB6 163 aa8.52□□□□□ -1.05
RPGR-208ENST00000482855 TRBV20-1A0A075B6N2 111 aa8.52□□□□□ -1.05
RPGR-208ENST00000482855 LINC01548A6NM66 108 aa8.52□□□□□ -1.05
RPGR-208ENST00000482855 TCL1BO95988 128 aa8.52□□□□□ -1.05
RPGR-208ENST00000482855 FAM27E3Q08E93 113 aa8.52□□□□□ -1.05
RPGR-208ENST00000482855 RNF5Q99942 180 aa8.52□□□□□ -1.05
RPGR-208ENST00000482855 CNOT1A5YKK6 2376 aaKnown RBP8.51□□□□□ -1.05
RPGR-208ENST00000482855 PKDREJQ9NTG1 2253 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 IGKV3D-20A0A0C4DH25 116 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 B5MCH6 92 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 COX7A1P24310 79 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 ADIPOQQ15848 244 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 ZNF672Q499Z4 452 aaPredicted RBP8.51□□□□□ -1.05
RPGR-208ENST00000482855 NEXN-AS1Q8NBZ9 246 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 PLEKHB2Q96CS7 222 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 SMIM2Q9BVW6 85 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 SMAD5-AS1Q9Y6J3 95 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 USP24Q9UPU5 2620 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 ORMDL2Q53FV1 153 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 CFAP161Q6P656 301 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 KAAG1Q9UBP8 84 aa8.51□□□□□ -1.05
RPGR-208ENST00000482855 SBSPONQ8IVN8 264 aa8.5□□□□□ -1.05
RPGR-208ENST00000482855 ANKRD29Q8N6D5 301 aa8.5□□□□□ -1.05
RPGR-208ENST00000482855 KIR2DL4Q99706 377 aa8.5□□□□□ -1.05
RPGR-208ENST00000482855 CD7P09564 240 aa8.5□□□□□ -1.05
RPGR-208ENST00000482855 SLC25A16P16260 332 aa8.5□□□□□ -1.05
RPGR-208ENST00000482855 SPANXN1Q5VSR9 72 aa8.5□□□□□ -1.05
RPGR-208ENST00000482855 NDUFA11Q86Y39 141 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms