RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 TEX22C9J3V5 150 aa11.16□□□□□ -0.62
COL9A2-207ENST00000482722 IGKCP01834 107 aa11.16□□□□□ -0.62
COL9A2-207ENST00000482722 SCGB2A2Q13296 93 aa11.16□□□□□ -0.62
COL9A2-207ENST00000482722 BUB1B-PAK6H3BSN5 160 aa11.16□□□□□ -0.62
COL9A2-207ENST00000482722 IL4P05112 153 aa11.16□□□□□ -0.62
COL9A2-207ENST00000482722 ADORA2A-AS1P86434 159 aa11.15□□□□□ -0.62
COL9A2-207ENST00000482722 ZC2HC1BQ5TFG8 222 aa11.15□□□□□ -0.62
COL9A2-207ENST00000482722 C8orf31Q8N9H6 132 aa11.15□□□□□ -0.62
COL9A2-207ENST00000482722 SHANK2-AS3Q9BTD1 123 aa11.15□□□□□ -0.62
COL9A2-207ENST00000482722 NPIPB5A8MRT5 1133 aa11.15□□□□□ -0.62
COL9A2-207ENST00000482722 IGFL4Q6B9Z1 124 aa11.15□□□□□ -0.62
COL9A2-207ENST00000482722 MAPKAPK5-AS1Q8N8E1 139 aa11.15□□□□□ -0.62
COL9A2-207ENST00000482722 FOXC2Q99958 501 aa11.15□□□□□ -0.62
COL9A2-207ENST00000482722 KAAG1Q9UBP8 84 aa11.15□□□□□ -0.62
COL9A2-207ENST00000482722 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.15□□□□□ -0.632e-7■■■■□ 20.5
COL9A2-207ENST00000482722 I3L2K1 104 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 C12orf74Q32Q52 190 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 MSRB1Q9NZV6 116 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 LRRK2Q5S007 2527 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 IGLV1-47P01700 117 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 CD3EP07766 207 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 GAGE13Q4V321 117 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 Q8TAT8 98 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 MAP1LC3AQ9H492 121 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
COL9A2-207ENST00000482722 H3BRN7 92 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
COL9A2-207ENST00000482722 EVI2AP22794 236 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 TCTEX1D4Q5JR98 221 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 PRO0461Q9UI25 63 aa11.14□□□□□ -0.63
COL9A2-207ENST00000482722 TMEM8BA6NDV4 472 aa11.13□□□□□ -0.63
COL9A2-207ENST00000482722 EGR2P11161 476 aaPredicted RBP11.13□□□□□ -0.63
COL9A2-207ENST00000482722 FCER1GP30273 86 aa11.13□□□□□ -0.63
COL9A2-207ENST00000482722 CRYBA4P53673 196 aa11.13□□□□□ -0.63
COL9A2-207ENST00000482722 TIMM23O14925 209 aa11.13□□□□□ -0.63
COL9A2-207ENST00000482722 CRYGBP07316 175 aa11.13□□□□□ -0.63
COL9A2-207ENST00000482722 RNF185Q96GF1 192 aa11.13□□□□□ -0.63
COL9A2-207ENST00000482722 TMEM160Q9NX00 188 aa11.13□□□□□ -0.63
COL9A2-207ENST00000482722 USP9YO00507 2555 aaPredicted RBP11.13□□□□□ -0.63
COL9A2-207ENST00000482722 IGHV3OR16-8A0A075B7F1 116 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 DPM2O94777 84 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 KLRB1Q12918 225 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 HES1Q14469 280 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 PSMG4Q5JS54 123 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 LYPD1Q8N2G4 141 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 ZNF491Q8N8L2 437 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 C20orf78Q9BR46 151 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 TRAV40A0A0B4J280 105 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
COL9A2-207ENST00000482722 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
COL9A2-207ENST00000482722 ZNF502Q8TBZ5 544 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 RNF125Q96EQ8 232 aa11.12□□□□□ -0.63
COL9A2-207ENST00000482722 K7EIM0 57 aa11.11□□□□□ -0.63
COL9A2-207ENST00000482722 GATA1P15976 413 aaPredicted RBP11.11□□□□□ -0.63
COL9A2-207ENST00000482722 SRSF1Q07955 248 aaKnown RBP eCLIP11.11□□□□□ -0.634e-7■■□□□ 13.9
COL9A2-207ENST00000482722 MRAP2Q96G30 205 aa11.11□□□□□ -0.63
COL9A2-207ENST00000482722 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
COL9A2-207ENST00000482722 ZNF462Q96JM2 2506 aa11.11□□□□□ -0.63
COL9A2-207ENST00000482722 ZANQ9Y493 2812 aa11.11□□□□□ -0.63
COL9A2-207ENST00000482722 B9A039 149 aa11.11□□□□□ -0.63
COL9A2-207ENST00000482722 TMEM158Q8WZ71 300 aa11.11□□□□□ -0.63
COL9A2-207ENST00000482722 GEMIN7Q9H840 131 aaKnown RBP11.11□□□□□ -0.63
COL9A2-207ENST00000482722 A0A1B0GWB2 263 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 IGHV3-23P01764 117 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 ZNF80P51504 273 aaPredicted RBP11.1□□□□□ -0.63
COL9A2-207ENST00000482722 KLRD1Q13241 179 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 TNFRSF6BO95407 300 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 A0A1W2PPR1 153 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 LCNL1Q6ZST4 164 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 HIST1H4GQ99525 98 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 AAMDCQ9H7C9 122 aa11.1□□□□□ -0.63
COL9A2-207ENST00000482722 MRPL35Q9NZE8 188 aaKnown RBP11.1□□□□□ -0.63
COL9A2-207ENST00000482722 CSPG4Q6UVK1 2322 aa11.09□□□□□ -0.63
COL9A2-207ENST00000482722 IGHV3-35A0A0C4DH35 117 aa11.09□□□□□ -0.63
COL9A2-207ENST00000482722 IGLC6P0CF74 106 aa11.09□□□□□ -0.63
COL9A2-207ENST00000482722 HLA-DMBP28068 263 aa11.09□□□□□ -0.63
COL9A2-207ENST00000482722 ZNF575Q86XF7 245 aa11.09□□□□□ -0.63
COL9A2-207ENST00000482722 TTC9CQ8N5M4 171 aa11.09□□□□□ -0.63
COL9A2-207ENST00000482722 NXT2Q9NPJ8 142 aaKnown RBP11.09□□□□□ -0.63
COL9A2-207ENST00000482722 ATP5LO75964 103 aa11.08□□□□□ -0.64
COL9A2-207ENST00000482722 APOMO95445 188 aa11.08□□□□□ -0.64
COL9A2-207ENST00000482722 PRR25Q96S07 402 aa11.08□□□□□ -0.64
COL9A2-207ENST00000482722 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
COL9A2-207ENST00000482722 TAL2Q16559 108 aa11.08□□□□□ -0.64
COL9A2-207ENST00000482722 ZNF672Q499Z4 452 aaPredicted RBP11.08□□□□□ -0.64
COL9A2-207ENST00000482722 TMEM190Q8WZ59 177 aa11.08□□□□□ -0.64
COL9A2-207ENST00000482722 MRPL16Q9NX20 251 aaKnown RBP11.08□□□□□ -0.64
COL9A2-207ENST00000482722 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
COL9A2-207ENST00000482722 ABCA12Q86UK0 2595 aa11.08□□□□□ -0.64
COL9A2-207ENST00000482722 ORM1P02763 201 aa11.07□□□□□ -0.64
COL9A2-207ENST00000482722 C8orf86Q6ZUL3 223 aa11.07□□□□□ -0.64
COL9A2-207ENST00000482722 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
COL9A2-207ENST00000482722 CDIP1Q9H305 208 aa11.07□□□□□ -0.64
COL9A2-207ENST00000482722 UCNP55089 124 aa11.06□□□□□ -0.64
COL9A2-207ENST00000482722 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
COL9A2-207ENST00000482722 NCBP2LA6PVI3 153 aaKnown RBP11.06□□□□□ -0.64
COL9A2-207ENST00000482722 FOXI1Q12951 378 aa11.06□□□□□ -0.64
COL9A2-207ENST00000482722 NBR2O15453 112 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms