RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FAM19A4Q96LR4 140 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 FAM210AQ96ND0 272 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 GOLT1BQ9Y3E0 138 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 DEFB4AO15263 64 aa9.61□□□□□ -0.87
HDAC1-208ENST00000482310 PDE6DO43924 150 aa9.61□□□□□ -0.87
HDAC1-208ENST00000482310 TAGLN2P37802 199 aaKnown RBP9.61□□□□□ -0.87
HDAC1-208ENST00000482310 RPL35P42766 123 aaKnown RBP9.61□□□□□ -0.87
HDAC1-208ENST00000482310 SRSF3P84103 164 aaKnown RBP9.61□□□□□ -0.87
HDAC1-208ENST00000482310 TMEM183BQ1AE95 376 aa9.61□□□□□ -0.87
HDAC1-208ENST00000482310 C1orf158Q8N1D5 194 aa9.61□□□□□ -0.87
HDAC1-208ENST00000482310 LINC01587Q99440 93 aa9.61□□□□□ -0.87
HDAC1-208ENST00000482310 TXNDC17Q9BRA2 123 aa9.61□□□□□ -0.87
HDAC1-208ENST00000482310 TCEAL7Q9BRU2 100 aa9.61□□□□□ -0.87
HDAC1-208ENST00000482310 NIPSNAP3BQ9BS92 247 aa9.61□□□□□ -0.87
HDAC1-208ENST00000482310 NAGKQ9UJ70 344 aa9.61□□□□□ -0.87
HDAC1-208ENST00000482310 RAB19A4D1S5 217 aa9.6□□□□□ -0.87
HDAC1-208ENST00000482310 ZNF705GA8MUZ8 300 aaPredicted RBP9.6□□□□□ -0.87
HDAC1-208ENST00000482310 KLLNB2CW77 178 aa9.6□□□□□ -0.87
HDAC1-208ENST00000482310 GCGP01275 180 aa9.6□□□□□ -0.87
HDAC1-208ENST00000482310 CRISP2P16562 243 aa9.6□□□□□ -0.87
HDAC1-208ENST00000482310 PMS2P11Q13670 270 aa9.6□□□□□ -0.87
HDAC1-208ENST00000482310 CLLU1Q5K131 121 aa9.6□□□□□ -0.87
HDAC1-208ENST00000482310 MUC21Q5SSG8 566 aa9.6□□□□□ -0.87
HDAC1-208ENST00000482310 C11orf52Q96A22 123 aa9.6□□□□□ -0.87
HDAC1-208ENST00000482310 CENPWQ5EE01 88 aa9.59□□□□□ -0.87
HDAC1-208ENST00000482310 X6R8D5 127 aa9.59□□□□□ -0.87
HDAC1-208ENST00000482310 PGPEP1LA6NFU8 196 aa9.58□□□□□ -0.88
HDAC1-208ENST00000482310 LTAP01374 205 aa9.58□□□□□ -0.88
HDAC1-208ENST00000482310 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
HDAC1-208ENST00000482310 ZNF80P51504 273 aaPredicted RBP9.58□□□□□ -0.88
HDAC1-208ENST00000482310 EMP1P54849 157 aa9.58□□□□□ -0.88
HDAC1-208ENST00000482310 SMUG1Q53HV7 270 aa9.58□□□□□ -0.88
HDAC1-208ENST00000482310 PRR27Q6MZM9 219 aa9.58□□□□□ -0.88
HDAC1-208ENST00000482310 ZC2HC1AQ96GY0 325 aa9.58□□□□□ -0.88
HDAC1-208ENST00000482310 TP53TG1Q9Y2A0 90 aa9.58□□□□□ -0.88
HDAC1-208ENST00000482310 LENEPQ9Y5L5 61 aa9.58□□□□□ -0.88
HDAC1-208ENST00000482310 U3KQK5 164 aa9.58□□□□□ -0.88
HDAC1-208ENST00000482310 IGHV4-28A0A0C4DH34 117 aa9.57□□□□□ -0.88
HDAC1-208ENST00000482310 FBLL1A6NHQ2 334 aaKnown RBP9.57□□□□□ -0.88
HDAC1-208ENST00000482310 C9JQL5 133 aa9.57□□□□□ -0.88
HDAC1-208ENST00000482310 RGS13O14921 159 aa9.57□□□□□ -0.88
HDAC1-208ENST00000482310 S100A9P06702 114 aaKnown RBP9.57□□□□□ -0.88
HDAC1-208ENST00000482310 SRP19P09132 144 aaKnown RBP9.57□□□□□ -0.88
HDAC1-208ENST00000482310 MGST1P10620 155 aaKnown RBP9.57□□□□□ -0.88
HDAC1-208ENST00000482310 GNG4P50150 75 aa9.57□□□□□ -0.88
HDAC1-208ENST00000482310 PEA15Q15121 130 aa9.57□□□□□ -0.88
HDAC1-208ENST00000482310 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
HDAC1-208ENST00000482310 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
HDAC1-208ENST00000482310 BAGE2Q86Y30 109 aa9.57□□□□□ -0.88
HDAC1-208ENST00000482310 PARLQ9H300 379 aa9.57□□□□□ -0.88
HDAC1-208ENST00000482310 KLF12Q9Y4X4 402 aa9.57□□□□□ -0.88
HDAC1-208ENST00000482310 TRBV7-9A0A0J9YWB2 115 aa9.56□□□□□ -0.88
HDAC1-208ENST00000482310 A0A0J9YWU9 116 aa9.56□□□□□ -0.88
HDAC1-208ENST00000482310 AZU1P20160 251 aa9.56□□□□□ -0.88
HDAC1-208ENST00000482310 TMEM256Q8N2U0 113 aa9.56□□□□□ -0.88
HDAC1-208ENST00000482310 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
HDAC1-208ENST00000482310 TRAV21A0A0B4J279 112 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 TRBV6-1A0A0K0K1D8 114 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 CBY3A6NI87 242 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 H7BYZ3 331 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 SH2D1AO60880 128 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 ZNF324O75467 553 aaPredicted RBP9.55□□□□□ -0.88
HDAC1-208ENST00000482310 TAS2R60P59551 318 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 RRN3P1Q2M238 152 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 Q6AWC8 147 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 COMMD7Q86VX2 200 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 TMEM183AQ8IXX5 376 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 Q8NAQ8 132 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 SMIM7Q9BQ49 75 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 C20orf144Q9BQM9 153 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 TP53TG3Q9ULZ0 132 aa9.55□□□□□ -0.88
HDAC1-208ENST00000482310 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
HDAC1-208ENST00000482310 IGHV1OR15-1A0A075B7D0 117 aa9.54□□□□□ -0.88
HDAC1-208ENST00000482310 M0R036 132 aa9.54□□□□□ -0.88
HDAC1-208ENST00000482310 PYGO2Q9BRQ0 406 aa9.54□□□□□ -0.88
HDAC1-208ENST00000482310 TMSB15BA0A087X1C1 80 aa9.53□□□□□ -0.88
HDAC1-208ENST00000482310 ZNF727A8MUV8 499 aa9.53□□□□□ -0.88
HDAC1-208ENST00000482310 PFN1P07737 140 aaKnown RBP9.53□□□□□ -0.88
HDAC1-208ENST00000482310 MIFP14174 115 aa9.53□□□□□ -0.88
HDAC1-208ENST00000482310 CRIP1P50238 77 aa9.53□□□□□ -0.88
HDAC1-208ENST00000482310 OR5I1Q13606 314 aa9.53□□□□□ -0.88
HDAC1-208ENST00000482310 ANXA2RQ3ZCQ2 193 aa9.53□□□□□ -0.88
HDAC1-208ENST00000482310 FAM162BQ5T6X4 162 aa9.53□□□□□ -0.88
HDAC1-208ENST00000482310 FAM159AQ6UWV7 190 aa9.53□□□□□ -0.88
HDAC1-208ENST00000482310 EIF4E3Q8N5X7 224 aaKnown RBP9.53□□□□□ -0.88
HDAC1-208ENST00000482310 C11orf21Q9P2W6 132 aa9.53□□□□□ -0.88
HDAC1-208ENST00000482310 TIMM8BQ9Y5J9 83 aaPredicted RBP9.53□□□□□ -0.88
HDAC1-208ENST00000482310 IGLV2-8P01709 118 aa9.52□□□□□ -0.89
HDAC1-208ENST00000482310 ORM1P02763 201 aa9.52□□□□□ -0.89
HDAC1-208ENST00000482310 CELA1Q9UNI1 258 aa9.52□□□□□ -0.89
HDAC1-208ENST00000482310 SMIM9A6NGZ8 99 aa9.51□□□□□ -0.89
HDAC1-208ENST00000482310 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
HDAC1-208ENST00000482310 GNRH2O43555 120 aa9.51□□□□□ -0.89
HDAC1-208ENST00000482310 TYMSP04818 313 aa9.51□□□□□ -0.89
HDAC1-208ENST00000482310 SFTA3P0C7M3 94 aa9.51□□□□□ -0.89
HDAC1-208ENST00000482310 RPL19P84098 196 aaKnown RBP9.51□□□□□ -0.89
HDAC1-208ENST00000482310 OCC1Q8TAD7 63 aa9.51□□□□□ -0.89
HDAC1-208ENST00000482310 TMEM263Q8WUH6 116 aaKnown RBP9.51□□□□□ -0.89
HDAC1-208ENST00000482310 C16orf74Q96GX8 76 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms