RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 RAB2AP61019 212 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 BLOC1S1P78537 153 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 ANXA2RQ3ZCQ2 193 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 MIR17HGQ75NE6 70 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 CCDC28AQ8IWP9 274 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 EXOC3-AS1Q8N2X6 119 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 ZFAND2AQ8N6M9 145 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 OR10G4Q8NGN3 311 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 OR10G9Q8NGN4 311 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 OR10G7Q8NGN6 311 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 FXYD5Q96DB9 178 aa6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 MRPL32Q9BYC8 188 aaKnown RBP6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 ACTR3CQ9C0K3 210 aaPredicted RBP6.77□□□□□ -1.33
TMEM39A-207ENST00000482162 C7orf71A4D174 169 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 RGS13O14921 159 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 CDC34P49427 236 aaPredicted RBP6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 TAS2R45P59539 299 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 ERCC8Q13216 396 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 C1orf134Q5TEV5 83 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 FAM213BQ8TBF2 198 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 RXFP4Q8TDU9 374 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 VGLL1Q99990 258 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 OR51M1Q9H341 326 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 FUT9Q9Y231 359 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 DNAH11Q96DT5 4516 aa6.76□□□□□ -1.33
TMEM39A-207ENST00000482162 MUC4Q99102 2169 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 PKD1P98161 4303 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 NBDYA0A0U1RRE5 68 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 CTXND1A0A1B0GTU2 59 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 CCL18P55774 89 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 IFITM2Q01629 132 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 ICAM4Q14773 271 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 KHDC3LQ587J8 217 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 FAM74A1Q5RGS3 127 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 FAM122CQ6P4D5 195 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 LYPD1Q8N2G4 141 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 AAMDCQ9H7C9 122 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 PKHD1P08F94 4074 aa6.75□□□□□ -1.33
TMEM39A-207ENST00000482162 DYNC1H1Q14204 4646 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 TRAV26-1A0A087WT03 109 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 GAGE12BA1L429 117 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 GAGE7O76087 117 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 NUDT3O95989 172 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 H2AFB1P0C5Y9 115 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 GAGE12FP0CL80 117 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 GAGE12GP0CL81 117 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 GAGE12IP0CL82 117 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 SOHLH1Q5JUK2 328 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 IBA57Q5T440 356 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 PRR9Q5T870 116 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 Q6ZTI0 123 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 EIF4E3Q8N5X7 224 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 BLNKQ8WV28 456 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 ATG101Q9BSB4 218 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 UPK3BQ9BT76 320 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 PAXXQ9BUH6 204 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 GSN-AS1Q9NRJ2 163 aa6.74□□□□□ -1.33
TMEM39A-207ENST00000482162 IGKV2-40A0A087WW87 121 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 MAP1LC3B2A6NCE7 125 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 SNURFLB1AK76 121 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 J3KRW8 73 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 SPINK4O60575 86 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 CXorf1O96002 111 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 IGKV2D-40P01614 121 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 RNASE4P34096 147 aaKnown RBP6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 PPT1P50897 306 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 ZNF138P52744 262 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 TCL1AP56279 114 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 BTN1A1Q13410 526 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 OR5I1Q13606 314 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 ESRGQ1W209 222 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 CLLU1Q5K131 121 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 PQLC2Q6ZP29 291 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 Q6ZQT7 251 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 SSX7Q7RTT5 188 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 MBD3L1Q8WWY6 194 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 RAB24Q969Q5 203 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 VSIG2Q96IQ7 327 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 MAP1LC3BQ9GZQ8 125 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 TP53TG3Q9ULZ0 132 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 KLF12Q9Y4X4 402 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 LENEPQ9Y5L5 61 aa6.73□□□□□ -1.33
TMEM39A-207ENST00000482162 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 OR7C2O60412 319 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 GPX1P07203 203 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 OR10J4P0C629 311 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 STAG3L2P0CL84 134 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 STAG3L3P0CL85 134 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 BTF3P20290 206 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 TMEM78Q5T7P6 136 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 SFT2D1Q8WV19 159 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 TMPRSS5Q9H3S3 457 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 Q9H8V8 135 aa6.72□□□□□ -1.33
TMEM39A-207ENST00000482162 IGHV1OR15-1A0A075B7D0 117 aa6.71□□□□□ -1.34
TMEM39A-207ENST00000482162 A0A096LPF7 62 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms