RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 LHBP01229 141 aa7.54□□□□□ -1.2
GARNL3-216ENST00000481242 SMIM20Q8N5G0 67 aa7.54□□□□□ -1.2
GARNL3-216ENST00000481242 ST6GALNAC6Q969X2 333 aa7.54□□□□□ -1.2
GARNL3-216ENST00000481242 MYMXA0A1B0GTQ4 84 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 TEX48A0A1B0GUV7 120 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 LGALS1P09382 135 aaKnown RBP7.53□□□□□ -1.2
GARNL3-216ENST00000481242 Q6ZSR3 168 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 ZNF524Q96C55 264 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 PGPEP1Q9NXJ5 209 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 ZNRD1Q9P1U0 126 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 LSM4Q9Y4Z0 139 aaKnown RBP7.53□□□□□ -1.2
GARNL3-216ENST00000481242 MED13Q9UHV7 2174 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 F5H768 121 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 IGLC1P0CG04 106 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 FXYD7P58549 80 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 MRPL53Q96EL3 112 aaKnown RBP7.53□□□□□ -1.2
GARNL3-216ENST00000481242 PYGO2Q9BRQ0 406 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 NHP2Q9NX24 153 aaKnown RBP7.53□□□□□ -1.2
GARNL3-216ENST00000481242 TRBV25-1A0A075B6N4 114 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 IGHV4-61A0A0C4DH41 118 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 HOXB4P17483 251 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-216ENST00000481242 DUX4L9Q6RFH8 374 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-216ENST00000481242 SS18L2Q9UHA2 77 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 HELZP42694 1942 aaKnown RBP7.53□□□□□ -1.2
GARNL3-216ENST00000481242 GGTLC3B5MD39 225 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 ADORA2A-AS1P86434 159 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 IL15RAQ13261 267 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 C9orf66Q5T8R8 295 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 C9orf153Q5TBE3 101 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 OVOL2Q9BRP0 275 aa7.53□□□□□ -1.2
GARNL3-216ENST00000481242 PRSS46E5RG02 174 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 SPINK13Q1W4C9 94 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 CTSZQ9UBR2 303 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 TRAV2A0A0B4J234 112 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 C9JQL5 133 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 NCR2O95944 276 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 PAX9P55771 341 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 FOXI2Q6ZQN5 318 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 SPAG8Q99932 426 aaPredicted RBP7.52□□□□□ -1.21
GARNL3-216ENST00000481242 IGHV3-73A0A0B4J1V6 119 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 TMEM89A2RUT3 159 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 IGHV4-39P01824 125 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 GRNP28799 593 aaKnown RBP7.52□□□□□ -1.21
GARNL3-216ENST00000481242 FAM231DQ6ZW35 169 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 C11orf53Q8IXP5 236 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 PHLDA1Q8WV24 401 aaPredicted RBP7.52□□□□□ -1.21
GARNL3-216ENST00000481242 TMEM158Q8WZ71 300 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 ZNF134P52741 427 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 BVES-AS1Q5T3Y7 98 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 RNF152Q8N8N0 203 aa7.52□□□□□ -1.21
GARNL3-216ENST00000481242 TRBV20-1A0A075B6N2 111 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 A0A1W2PPM0 123 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 NDUFS7O75251 213 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 PRR25Q96S07 402 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 J3KT08 172 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 CCL24O00175 119 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 PAX4O43316 350 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 IGHV4-59P01825 116 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 IGFL4Q6B9Z1 124 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 IGHV4-30-2A0A087WSY4 118 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 SYS1-DBNDD2H3BUS1 97 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 M0R2P5 195 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 IGKV1-39P01597 117 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 IGKV1D-39P04432 117 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 KRTAP27-1Q3LI81 207 aa7.51□□□□□ -1.21
GARNL3-216ENST00000481242 B5MCH6 92 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 NPBQ8NG41 125 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 TMEM141Q96I45 108 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 PKIGQ9Y2B9 76 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 Q6ZWC4 215 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 A0A087WWL8 130 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 SNAI2O43623 268 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 CDPF1Q6NVV7 123 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 LRRC75A-AS1Q8N1F1 130 aa7.5□□□□□ -1.21
GARNL3-216ENST00000481242 I3L3M4 83 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 ATXN8Q156A1 80 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 ZNF493Q6ZR52 646 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 ZNF561-AS1K7EIQ3 104 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 TNFRSF6BO95407 300 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 HERV-K104P63124 156 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 TAL2Q16559 108 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 PRIMA1Q86XR5 153 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 ZNF491Q8N8L2 437 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 TMEM243Q9BU79 118 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 SELENOKQ9Y6D0 94 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 HOXD3P31249 432 aaPredicted RBP7.49□□□□□ -1.21
GARNL3-216ENST00000481242 AMN1Q8IY45 258 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 IGFBPL1Q8WX77 278 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 TIMM21Q9BVV7 248 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 PLXND1Q9Y4D7 1925 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 TRAV13-1A0A0B4J241 112 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 F8WEM9 126 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 FAM104BQ5XKR9 115 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 NEGR1Q7Z3B1 354 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 BCL6BQ8N143 479 aaPredicted RBP7.49□□□□□ -1.21
GARNL3-216ENST00000481242 ZNF114Q8NC26 417 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 NAV2Q8IVL1 2488 aa7.49□□□□□ -1.21
GARNL3-216ENST00000481242 PRORYQ9H606 182 aa7.48□□□□□ -1.21
GARNL3-216ENST00000481242 RBAKDNA6NC62 111 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms