RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ARHGEF10	O15013	1369 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	DOCK5	Q9H7D0	1870 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	ECM29	Q5VYK3	1845 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	TAF1L	Q8IZX4	1826 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	ROS1	P08922	2347 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	PIGBOS1	A0A0B4J2F0	54 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	TRBV30	A0A0K0K1B3	111 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	TMEM30CP	A0ZSE6	113 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173		A6NIN4	97 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	HIGD1C	A8MV81	97 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	NCR2	O95944	276 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	CCL4	P13236	92 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	PDE6G	P18545	87 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	AKR1D1	P51857	326 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	CAV3	P56539	151 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	FXYD4	P59646	89 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	ARPC4	P59998	168 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	CCDC58	Q4VC31	144 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	NDUFA11	Q86Y39	141 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	ATP6V0E2	Q8NHE4	81 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	TCEAL4	Q96EI5	215 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	DMAC1	Q96GE9	116 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	TSC22D3	Q99576	134 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	NIT2	Q9NQR4	276 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	MRPL36	Q9P0J6	103 aa	Known RBP	0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	COMMD3	Q9UBI1	195 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	NOP16	Q9Y3C1	178 aa	Known RBP	0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	DIDO1	Q9BTC0	2240 aa	Known RBP	0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	WDR90	Q96KV7	1748 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	TCOF1	Q13428	1488 aa	Known RBP	0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	OVOS2	A0A0J9YW53	1432 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	OVOS2	Q6IE36	1432 aa		0.46	□□□□□ -2.34
CCNL1-223	ENST00000481173	MAST2	Q6P0Q8	1798 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	SCN10A	Q9Y5Y9	1956 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	ALPK2	Q86TB3	2170 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	PTPRS	Q13332	1948 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	TRBV20-1	A0A075B6N2	111 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	TEX49	A0A1B0GTD5	131 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173		A6NN06	94 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	CCDC179	H3BU77	68 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173		K7ERU9	68 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	CDC42EP2	O14613	210 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	IGF2	P01344	180 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	HMGN1	P05114	100 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	MPC1L	P0DKB6	136 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	ADCYAP1	P18509	176 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	GUCA1A	P43080	201 aa	Predicted RBP	0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	EFNA4	P52798	201 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	RPL37A	P61513	92 aa	Known RBP	0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	HIST1H1A	Q02539	215 aa	Predicted RBP	0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	IQCJ	Q1A5X6	159 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	SPINK13	Q1W4C9	94 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	SPRN	Q5BIV9	151 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	RPL7L1	Q6DKI1	246 aa	Known RBP	0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	SCIMP	Q6UWF3	145 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	LYPD5	Q6UWN5	251 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	ATP11AUN	Q6ZP68	121 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	ZCCHC23	Q6ZST2	131 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	SLC25A26	Q70HW3	274 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173		Q86TA4	180 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	SNX29P2	Q8IUI4	249 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	COPS9	Q8WXC6	57 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	PSMG3	Q9BT73	122 aa	Predicted RBP	0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	SMIM3	Q9BZL3	60 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	TAF9B	Q9HBM6	251 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	COA4	Q9NYJ1	87 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	MRPL35	Q9NZE8	188 aa	Known RBP	0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	ERG28	Q9UKR5	140 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	UHRF1BP1L	A0JNW5	1464 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	AHNAK	Q09666	5890 aa	Known RBP	0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	PIK3C2A	O00443	1686 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	ARHGAP32	A7KAX9	2087 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	FAM135B	Q49AJ0	1406 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	FGD6	Q6ZV73	1430 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	TRPM1	Q7Z4N2	1603 aa		0.45	□□□□□ -2.34
CCNL1-223	ENST00000481173	GREB1	Q4ZG55	1949 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	CCDC171	Q6TFL3	1326 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	SBF1	O95248	1867 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	ARAP1	Q96P48	1450 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	TRAV17	A0A0B4J275	112 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	TRBV10-1	A0A0K0K1A3	114 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	LOC105371267	A0A1B0GV96	52 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	FAM92A	A1XBS5	289 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	NUPR2	A6NF83	97 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	MCRIP1	C9JLW8	97 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173		J3QLW9	94 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	ARPC5	O15511	151 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	CCK	P06307	115 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	CD14	P08571	375 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	PIP	P12273	146 aa	Predicted RBP	0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	IL7	P13232	177 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	COPZ1	P61923	177 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	RRAS2	P62070	204 aa	Predicted RBP	0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	SMIM21	Q3B7S5	101 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	SPINK9	Q5DT21	86 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	CLLU1	Q5K131	121 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	LINC01545	Q5VT33	79 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	XAF1	Q6GPH4	301 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	KCNRG	Q8N5I3	272 aa		0.44	□□□□□ -2.34

Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms