RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 HEATR1Q9H583 2144 aaKnown RBP2.35□□□□□ -2.03
COPA-203ENST00000481040 ALPK2Q86TB3 2170 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 ZNF736B4DX44 427 aaPredicted RBP2.35□□□□□ -2.03
COPA-203ENST00000481040 SULT1C4O75897 302 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 KDELR1P24390 212 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 KRTAP26-1Q6PEX3 210 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 TEX261Q6UWH6 196 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 CTAGE3PQ8IX95 158 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 Q8N2B8 174 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 ZNF625Q96I27 306 aaPredicted RBP2.35□□□□□ -2.03
COPA-203ENST00000481040 LPAR5Q9H1C0 372 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 COMMD3Q9UBI1 195 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 ERG28Q9UKR5 140 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 CPS1P31327 1500 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 LAMB4A4D0S4 1761 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 LAMB2P55268 1798 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 RFX7Q2KHR2 1363 aa2.35□□□□□ -2.03
COPA-203ENST00000481040 K7ERU9 68 aa2.34□□□□□ -2.03
COPA-203ENST00000481040 FREM3P0C091 2139 aa2.34□□□□□ -2.03
COPA-203ENST00000481040 PCBD1P61457 104 aa2.34□□□□□ -2.03
COPA-203ENST00000481040 RPS25P62851 125 aaKnown RBP2.34□□□□□ -2.03
COPA-203ENST00000481040 TEN1Q86WV5 123 aa2.34□□□□□ -2.03
COPA-203ENST00000481040 GKN2Q86XP6 184 aa2.34□□□□□ -2.03
COPA-203ENST00000481040 FAM19A2Q8N3H0 131 aa2.34□□□□□ -2.03
COPA-203ENST00000481040 CGREF1Q99674 301 aa2.34□□□□□ -2.03
COPA-203ENST00000481040 DNAJC15Q9Y5T4 150 aa2.34□□□□□ -2.03
COPA-203ENST00000481040 MUC3AQ02505 3323 aa2.34□□□□□ -2.03
COPA-203ENST00000481040 LRP6O75581 1613 aa2.34□□□□□ -2.04
COPA-203ENST00000481040 RNF17Q9BXT8 1623 aaKnown RBP2.34□□□□□ -2.04
COPA-203ENST00000481040 USP54Q70EL1 1684 aa2.34□□□□□ -2.04
COPA-203ENST00000481040 MED14O60244 1454 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 C3orf85A0A1B0GTC6 90 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 CD14P08571 375 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 ETV6P41212 452 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 DNAJB13P59910 316 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 PCOTHQ58A44 107 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 RPL13AP3Q6NVV1 102 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 C15orf53Q8NAA6 179 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 ZNF431Q8TF32 576 aaPredicted RBP2.33□□□□□ -2.04
COPA-203ENST00000481040 METTL1Q9UBP6 276 aaKnown RBP2.33□□□□□ -2.04
COPA-203ENST00000481040 ARHGAP31Q2M1Z3 1444 aa2.33□□□□□ -2.04
COPA-203ENST00000481040 MYOFQ9NZM1 2061 aa2.32□□□□□ -2.04
COPA-203ENST00000481040 SETXQ7Z333 2677 aaKnown RBP2.32□□□□□ -2.04
COPA-203ENST00000481040 CCL16O15467 120 aa2.32□□□□□ -2.04
COPA-203ENST00000481040 NCR2O95944 276 aa2.32□□□□□ -2.04
COPA-203ENST00000481040 CD3DP04234 171 aa2.32□□□□□ -2.04
COPA-203ENST00000481040 CKS2P33552 79 aa2.32□□□□□ -2.04
COPA-203ENST00000481040 FOXI2Q6ZQN5 318 aa2.32□□□□□ -2.04
COPA-203ENST00000481040 OTOSQ8NHW6 89 aa2.32□□□□□ -2.04
COPA-203ENST00000481040 PATE1Q8WXA2 126 aa2.32□□□□□ -2.04
COPA-203ENST00000481040 KLK9Q9UKQ9 250 aa2.32□□□□□ -2.04
COPA-203ENST00000481040 MAGI1Q96QZ7 1491 aaPredicted RBP2.32□□□□□ -2.04
COPA-203ENST00000481040 TRANK1O15050 2925 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 LOC107984156A0A0G2JMH3 177 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 PNMA8CA0A1B0GUJ8 204 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 FAM236AA0A1B0GUQ0 79 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 FAM236BA0A1B0GV22 79 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 COPZ1P61923 177 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 MIR22HGQ0VDD5 57 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 ASB16-AS1Q495Z4 193 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.31□□□□□ -2.04
COPA-203ENST00000481040 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 CASC2Q6XLA1 102 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 ARL17AQ8IVW1 177 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 C10orf111Q8N326 155 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 OR10AC1Q8NH08 325 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 LINC00052Q96N35 136 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 ORMDL1Q9P0S3 153 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 MPC1Q9Y5U8 109 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 CHD8Q9HCK8 2581 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 MAST4O15021 2626 aa2.31□□□□□ -2.04
COPA-203ENST00000481040 MUC4Q99102 2169 aa2.3□□□□□ -2.04
COPA-203ENST00000481040 EYSQ5T1H1 3165 aa2.3□□□□□ -2.04
COPA-203ENST00000481040 MKI67P46013 3256 aaKnown RBP2.3□□□□□ -2.04
COPA-203ENST00000481040 NPFFO15130 113 aa2.3□□□□□ -2.04
COPA-203ENST00000481040 MRPS14O60783 128 aaKnown RBP2.3□□□□□ -2.04
COPA-203ENST00000481040 FAM74A1Q5RGS3 127 aa2.3□□□□□ -2.04
COPA-203ENST00000481040 ZCCHC23Q6ZST2 131 aa2.3□□□□□ -2.04
COPA-203ENST00000481040 C1orf54Q8WWF1 131 aa2.3□□□□□ -2.04
COPA-203ENST00000481040 CIB3Q96Q77 187 aaPredicted RBP2.3□□□□□ -2.04
COPA-203ENST00000481040 PTPRFP10586 1907 aa2.29□□□□□ -2.04
COPA-203ENST00000481040 BIVM-ERCC5R4GMW8 1640 aa2.29□□□□□ -2.04
COPA-203ENST00000481040 F8W1H4 67 aa2.29□□□□□ -2.04
COPA-203ENST00000481040 TPST1O60507 370 aa2.29□□□□□ -2.04
COPA-203ENST00000481040 CLLU1Q5K131 121 aa2.29□□□□□ -2.04
COPA-203ENST00000481040 OR10AG1Q8NH19 301 aa2.29□□□□□ -2.04
COPA-203ENST00000481040 SLC35B3Q9H1N7 401 aa2.29□□□□□ -2.04
COPA-203ENST00000481040 CDC42SE1Q9NRR8 79 aa2.29□□□□□ -2.04
COPA-203ENST00000481040 GRIN2AQ12879 1464 aa2.28□□□□□ -2.04
COPA-203ENST00000481040 IGHV1-24A0A0C4DH33 117 aa2.28□□□□□ -2.04
COPA-203ENST00000481040 LINC00587B1AMM8 73 aa2.28□□□□□ -2.04
COPA-203ENST00000481040 ZNF670-ZNF695F2Z2N8 137 aa2.28□□□□□ -2.04
COPA-203ENST00000481040 EDF1O60869 148 aaKnown RBP2.28□□□□□ -2.04
COPA-203ENST00000481040 COX7CP15954 63 aa2.28□□□□□ -2.04
COPA-203ENST00000481040 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
COPA-203ENST00000481040 SELENOWP63302 87 aa2.28□□□□□ -2.04
COPA-203ENST00000481040 ARL11Q969Q4 196 aa2.28□□□□□ -2.04
COPA-203ENST00000481040 MED9Q9NWA0 146 aa2.28□□□□□ -2.04
COPA-203ENST00000481040 LSM2Q9Y333 95 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms