RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 RLN2P04090 185 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 HTN1P15515 57 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 AZU1P20160 251 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 CDKN1BP46527 198 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 RPL29P47914 159 aaKnown RBP4.31□□□□□ -1.72
VPS50-215ENST00000480943 OXA1LQ15070 435 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 FCN2Q15485 313 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 ATP6V1FQ16864 119 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 UBE2DNLQ8IWF7 75 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 OR5C1Q8NGR4 320 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 OR10J6PQ8NGY7 276 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 THAP6Q8TBB0 222 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 LINC01587Q99440 93 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 HECTD4Q9Y4D8 3996 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 PLAC8L1A1L4L8 177 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 CBY3A6NI87 242 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 LYRM9A8MSI8 78 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 E5RGE8 158 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 M0R2N4 97 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 MPDU1O75352 247 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 DEFB130BP0DP73 79 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 DEFB130AP0DP74 79 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 PYYP10082 97 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 TSPOP30536 169 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 CLINT1Q14677 625 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 GCSAMLQ5JQS6 135 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 TMEM256Q8N2U0 113 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 BLNKQ8WV28 456 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 SAT2Q96F10 170 aaPredicted RBP4.3□□□□□ -1.72
VPS50-215ENST00000480943 C16orf74Q96GX8 76 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 NPCDR1Q9BY65 106 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 NMES1Q9C002 83 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 SLC25A31Q9H0C2 315 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 ZNF586Q9NXT0 402 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 DNAH17Q9UFH2 4485 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
VPS50-215ENST00000480943 IGLV2-18A0A075B6J9 118 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 TRBV19A0A075B6N1 114 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 M0R3E3 92 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 SSNA1O43805 119 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 ZNF253O75346 499 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 HIST1H1EP10412 219 aaKnown RBP4.29□□□□□ -1.72
VPS50-215ENST00000480943 LEPP41159 167 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 H2BFSP57053 126 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 TAS2R60P59551 318 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 DEFA1P59665 94 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 DEFA3P59666 94 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 GUK1Q16774 197 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 MIR17HGQ75NE6 70 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 TMEM263Q8WUH6 116 aaKnown RBP4.29□□□□□ -1.72
VPS50-215ENST00000480943 PPP1R1CQ8WVI7 109 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 FAM210BQ96KR6 192 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 C20orf144Q9BQM9 153 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 MARVELD1Q9BSK0 173 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 SLC25A2Q9BXI2 301 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 TMEM14CQ9P0S9 112 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 TIMM9Q9Y5J7 89 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 HERC2O95714 4834 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 MUC4Q99102 2169 aa4.29□□□□□ -1.72
VPS50-215ENST00000480943 TRAV12-3A0A0B4J271 114 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 C17orf112F2Z3M2 114 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 F5H768 121 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 H7BYZ3 331 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 NDUFB4O95168 129 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 MPC2O95563 127 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 ATP5G1P05496 136 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 OR10J4P0C629 311 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 CT45A10P0DMU9 189 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 ATP5G3P48201 142 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 CYCSP99999 105 aaKnown RBP4.28□□□□□ -1.72
VPS50-215ENST00000480943 ERCC8Q13216 396 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 EXOC3-AS1Q8N2X6 119 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 C15orf53Q8NAA6 179 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 RNASE8Q8TDE3 154 aaKnown RBP4.28□□□□□ -1.72
VPS50-215ENST00000480943 ATP5SQ99766 215 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
VPS50-215ENST00000480943 SMIM3Q9BZL3 60 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 WDR61Q9GZS3 305 aaKnown RBP4.28□□□□□ -1.72
VPS50-215ENST00000480943 OR51M1Q9H341 326 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 SDF2L1Q9HCN8 221 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 NOP10Q9NPE3 64 aaKnown RBP4.28□□□□□ -1.72
VPS50-215ENST00000480943 KCNIP2Q9NS61 270 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 PRELID1Q9Y255 219 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 HSPB11Q9Y547 144 aa4.28□□□□□ -1.72
VPS50-215ENST00000480943 TIMM8BQ9Y5J9 83 aaPredicted RBP4.28□□□□□ -1.72
VPS50-215ENST00000480943 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
VPS50-215ENST00000480943 IGKV2-40A0A087WW87 121 aaPredicted RBP4.27□□□□□ -1.73
VPS50-215ENST00000480943 C7orf71A4D174 169 aa4.27□□□□□ -1.73
VPS50-215ENST00000480943 SNURFLB1AK76 121 aa4.27□□□□□ -1.73
VPS50-215ENST00000480943 OR7C2O60412 319 aa4.27□□□□□ -1.73
VPS50-215ENST00000480943 IGKV2D-40P01614 121 aaPredicted RBP4.27□□□□□ -1.73
VPS50-215ENST00000480943 PET100P0DJ07 73 aa4.27□□□□□ -1.73
VPS50-215ENST00000480943 RPL12P30050 165 aaKnown RBP4.27□□□□□ -1.73
VPS50-215ENST00000480943 BTN1A1Q13410 526 aa4.27□□□□□ -1.73
VPS50-215ENST00000480943 PDE6HQ13956 83 aa4.27□□□□□ -1.73
VPS50-215ENST00000480943 FFAR4Q5NUL3 377 aa4.27□□□□□ -1.73
VPS50-215ENST00000480943 FAM122CQ6P4D5 195 aa4.27□□□□□ -1.73
VPS50-215ENST00000480943 ZNF493Q6ZR52 646 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms