RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 HTN1P15515 57 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 PPT1P50897 306 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 BTN1A1Q13410 526 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 PMS2P11Q13670 270 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 PRR9Q5T870 116 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 GFI1BQ5VTD9 330 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 Q6ZQT7 251 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 PRNTQ86SH4 94 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 CCDC28AQ8IWP9 274 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 CYB561D1Q8N8Q1 229 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 ZNF680Q8NEM1 530 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 FAM19A4Q96LR4 140 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 ATG101Q9BSB4 218 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 NKX6-2Q9C056 277 aaPredicted RBP6.54□□□□□ -1.36
VCP-206ENST00000480327 MANBALQ9NQG1 85 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 X6R8D5 127 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 IGHV4-28A0A0C4DH34 117 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 SCO2A0A1W2PP80 73 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 ZNF705GA8MUZ8 300 aaPredicted RBP6.53□□□□□ -1.36
VCP-206ENST00000480327 F6UZH7 168 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 IFNA1P01562 189 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 IGLV2-11P01706 119 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 FLI1Q01543 452 aaPredicted RBP6.53□□□□□ -1.36
VCP-206ENST00000480327 ZNF705AQ6ZN79 300 aaPredicted RBP6.53□□□□□ -1.36
VCP-206ENST00000480327 ZFAND2AQ8N6M9 145 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 ARL6IP6Q8N6S5 226 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 TVP23CQ96ET8 276 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 C8orf49Q96NF6 230 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 ODF3Q96PU9 254 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 LINC01587Q99440 93 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 PSG8Q9UQ74 426 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 ARL2-SNX15V9GYD0 113 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 PKD1P98161 4303 aa6.53□□□□□ -1.36
VCP-206ENST00000480327 SERTM2A0A1B0GWG4 89 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 C7orf71A4D174 169 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 KLLNB2CW77 178 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 BCL2P10415 239 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 CRISP2P16562 243 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 AKR1C3P42330 323 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 EMP1P54849 157 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 UBE2G1P62253 170 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 CEMP1Q6PRD7 247 aaPredicted RBP6.52□□□□□ -1.37
VCP-206ENST00000480327 SLC7A5P1Q8MH63 180 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 TMEM75Q8N9X5 138 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 HIST1H2BAQ96A08 127 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 NDFIP1Q9BT67 221 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 TREM1Q9NP99 234 aa6.52□□□□□ -1.37
VCP-206ENST00000480327 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
VCP-206ENST00000480327 CXorf65A6NEN9 183 aa6.51□□□□□ -1.37
VCP-206ENST00000480327 MIFP14174 115 aa6.51□□□□□ -1.37
VCP-206ENST00000480327 AZU1P20160 251 aa6.51□□□□□ -1.37
VCP-206ENST00000480327 CTAG1AP78358 180 aa6.51□□□□□ -1.37
VCP-206ENST00000480327 RRN3P1Q2M238 152 aa6.51□□□□□ -1.37
VCP-206ENST00000480327 Q8NAQ8 132 aa6.51□□□□□ -1.37
VCP-206ENST00000480327 NIPSNAP3BQ9BS92 247 aa6.51□□□□□ -1.37
VCP-206ENST00000480327 DNAH11Q96DT5 4516 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 LOC105371267A0A1B0GV96 52 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 NUPR2A6NF83 97 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 RBFOX3A6NFN3 312 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 H7BYZ3 331 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 ZNF324O75467 553 aaPredicted RBP6.5□□□□□ -1.37
VCP-206ENST00000480327 NMBP08949 121 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 MEF2BQ02080 365 aaPredicted RBP6.5□□□□□ -1.37
VCP-206ENST00000480327 TOR2AQ5JU69 321 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 MUC21Q5SSG8 566 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 Q86TA4 180 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 TMEM256Q8N2U0 113 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 NHLRC2Q8NBF2 726 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 LYPD6BQ8NI32 183 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 FMC1Q96HJ9 113 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 NEU1Q99519 415 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 DERL1Q9BUN8 251 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 MED9Q9NWA0 146 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 VAX2Q9UIW0 290 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 NAGKQ9UJ70 344 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 LENEPQ9Y5L5 61 aa6.5□□□□□ -1.37
VCP-206ENST00000480327 TRBV7-9A0A0J9YWB2 115 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 SMIM9A6NGZ8 99 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 GCGP01275 180 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 ZNF80P51504 273 aaPredicted RBP6.49□□□□□ -1.37
VCP-206ENST00000480327 CEBPGP53567 150 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 TAS2R60P59551 318 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 IFITM2Q01629 132 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 TMEM183BQ1AE95 376 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 SAPCD1Q5SSQ6 148 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 C2CD4CQ8TF44 421 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 C20orf144Q9BQM9 153 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 TCEAL7Q9BRU2 100 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 EIF5A2Q9GZV4 153 aaKnown RBP6.49□□□□□ -1.37
VCP-206ENST00000480327 TP53TG3Q9ULZ0 132 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 KLF12Q9Y4X4 402 aa6.49□□□□□ -1.37
VCP-206ENST00000480327 RAB19A4D1S5 217 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 FBLL1A6NHQ2 334 aaKnown RBP6.48□□□□□ -1.37
VCP-206ENST00000480327 CBY3A6NI87 242 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 PDE6DO43924 150 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 TAGLN2P37802 199 aaKnown RBP6.48□□□□□ -1.37
VCP-206ENST00000480327 RPL35P42766 123 aaKnown RBP6.48□□□□□ -1.37
VCP-206ENST00000480327 ZNF674Q2M3X9 581 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 ZNF506Q5JVG8 444 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 Q6AWC8 147 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms