RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 TTC28Q96AY4 2481 aa0.42□□□□□ -2.34
CCDC58-204ENST00000479414 CELSR1Q9NYQ6 3014 aa0.42□□□□□ -2.34
CCDC58-204ENST00000479414 BRCA2P51587 3418 aa0.42□□□□□ -2.34
CCDC58-204ENST00000479414 CC2D2AQ9P2K1 1620 aa0.42□□□□□ -2.34
CCDC58-204ENST00000479414 PKD1L1Q8TDX9 2849 aa0.42□□□□□ -2.34
CCDC58-204ENST00000479414 IQSEC2Q5JU85 1478 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 CELSR2Q9HCU4 2923 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 THOC2Q8NI27 1593 aaKnown RBP0.41□□□□□ -2.34
CCDC58-204ENST00000479414 CRYBG3Q68DQ2 2970 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 PIK3C2AO00443 1686 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 LAMA3Q16787 3333 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 NCOR1O75376 2440 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 RPL37AP61513 92 aaKnown RBP0.41□□□□□ -2.34
CCDC58-204ENST00000479414 Q6ZQY7 126 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 DYDC1Q8WWB3 177 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 OR4C12Q96R67 309 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 TPRKBQ9Y3C4 175 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 IGSF10Q6WRI0 2623 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 CSMD1Q96PZ7 3565 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 POLQO75417 2590 aa0.41□□□□□ -2.34
CCDC58-204ENST00000479414 ADGBQ8N7X0 1667 aa0.4□□□□□ -2.34
CCDC58-204ENST00000479414 FLNAP21333 2647 aaKnown RBP0.4□□□□□ -2.34
CCDC58-204ENST00000479414 FRYQ5TBA9 3013 aa0.4□□□□□ -2.35
CCDC58-204ENST00000479414 CICQ96RK0 1608 aaPredicted RBP0.4□□□□□ -2.35
CCDC58-204ENST00000479414 A0A0J9YY99 117 aa0.4□□□□□ -2.35
CCDC58-204ENST00000479414 KPNA4O00629 521 aaPredicted RBP0.4□□□□□ -2.35
CCDC58-204ENST00000479414 PDE6GP18545 87 aa0.4□□□□□ -2.35
CCDC58-204ENST00000479414 GNG10P50151 68 aa0.4□□□□□ -2.35
CCDC58-204ENST00000479414 TCTAP57738 103 aa0.4□□□□□ -2.35
CCDC58-204ENST00000479414 DIRC1Q969H9 104 aa0.4□□□□□ -2.35
CCDC58-204ENST00000479414 BCL9LQ86UU0 1499 aa0.4□□□□□ -2.35
CCDC58-204ENST00000479414 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.35
CCDC58-204ENST00000479414 MAP1BP46821 2468 aaKnown RBP0.4□□□□□ -2.35
CCDC58-204ENST00000479414 ASPMQ8IZT6 3477 aa0.4□□□□□ -2.35
CCDC58-204ENST00000479414 FAM208BQ5VWN6 2430 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 OTOGQ6ZRI0 2925 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 UTP20O75691 2785 aaKnown RBP0.39□□□□□ -2.35
CCDC58-204ENST00000479414 ITPR1Q14643 2758 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 H3BQV1 296 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 FABP4P15090 132 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 NEDD8Q15843 81 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 NEK7Q8TDX7 302 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 RMND5BQ96G75 393 aaPredicted RBP0.39□□□□□ -2.35
CCDC58-204ENST00000479414 BOLA2Q9H3K6 86 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 BOKQ9UMX3 212 aaPredicted RBP0.39□□□□□ -2.35
CCDC58-204ENST00000479414 NUBP2Q9Y5Y2 271 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 VPS13AQ96RL7 3174 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 ERCC6Q03468 1493 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 CTTNBP2Q8WZ74 1663 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 NF1P21359 2839 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 ANKRD31Q8N7Z5 1873 aa0.39□□□□□ -2.35
CCDC58-204ENST00000479414 DSTQ03001 7570 aaKnown RBP0.39□□□□□ -2.35
CCDC58-204ENST00000479414 TOP2BQ02880 1626 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 ALKQ9UM73 1620 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 TNCP24821 2201 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 ATRQ13535 2644 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 FLNCQ14315 2725 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 KMT2AQ03164 3969 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 PRRC2CQ9Y520 2896 aaKnown RBP0.38□□□□□ -2.35
CCDC58-204ENST00000479414 NBEAL1Q6ZS30 2694 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 NUP210Q8TEM1 1887 aaPredicted RBP0.38□□□□□ -2.35
CCDC58-204ENST00000479414 LOC285556D6RIA3 1793 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 KDM5AP29375 1690 aaKnown RBP0.38□□□□□ -2.35
CCDC58-204ENST00000479414 KDM5CP41229 1560 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 SHANK2Q9UPX8 1470 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 TRDV1A0A1B0GX56 115 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 GABARAPH6UMI1 98 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 FABP2P12104 132 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 SERPINB1P30740 379 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 SPINK7P58062 85 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 C3orf33Q6P1S2 294 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 LINC00299Q6ZSB3 139 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 EFCAB11Q9BUY7 163 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 BIN3Q9NQY0 253 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 PLAC8Q9NZF1 115 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 LRRK2Q5S007 2527 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 CEP250Q9BV73 2442 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 XIRP2A4UGR9 3374 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 PIEZO2Q9H5I5 2752 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 NBPF19A0A087WUL8 3843 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 LOC400499M0QZD8 3231 aa0.38□□□□□ -2.35
CCDC58-204ENST00000479414 NIPBLQ6KC79 2804 aaeCLIP0.37□□□□□ -2.35
CCDC58-204ENST00000479414 MXRA5Q9NR99 2828 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 TLN1Q9Y490 2541 aaKnown RBP0.37□□□□□ -2.35
CCDC58-204ENST00000479414 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 WDR87Q6ZQQ6 2873 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 TENM2Q9NT68 2774 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 XIRP1Q702N8 1843 aaKnown RBP0.37□□□□□ -2.35
CCDC58-204ENST00000479414 CDH23Q9H251 3354 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 Q6ZS92 163 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 TSKUQ8WUA8 353 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 JPT1Q9UK76 154 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 ZFYVE26Q68DK2 2539 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 ZZEF1O43149 2961 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 LRBAP50851 2863 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 CLASP1Q7Z460 1538 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 NSD1Q96L73 2696 aaPredicted RBP0.37□□□□□ -2.35
CCDC58-204ENST00000479414 FRYLO94915 3013 aa0.37□□□□□ -2.35
CCDC58-204ENST00000479414 GVINP1Q7Z2Y8 2422 aa0.36□□□□□ -2.35
CCDC58-204ENST00000479414 DMXL1Q9Y485 3027 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms