RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 RPL23P62829 140 aaKnown RBP9.57□□□□□ -0.88
CHD3-210ENST00000479080 OR5I1Q13606 314 aa9.57□□□□□ -0.88
CHD3-210ENST00000479080 SOHLH1Q5JUK2 328 aa9.57□□□□□ -0.88
CHD3-210ENST00000479080 GFI1BQ5VTD9 330 aa9.57□□□□□ -0.88
CHD3-210ENST00000479080 LINC01551Q86U37 167 aa9.57□□□□□ -0.88
CHD3-210ENST00000479080 SDF2L1Q9HCN8 221 aa9.57□□□□□ -0.88
CHD3-210ENST00000479080 LENEPQ9Y5L5 61 aa9.57□□□□□ -0.88
CHD3-210ENST00000479080 PRKDCP78527 4128 aaKnown RBP9.56□□□□□ -0.88
CHD3-210ENST00000479080 GNG4P50150 75 aa9.56□□□□□ -0.88
CHD3-210ENST00000479080 ZNF575Q86XF7 245 aa9.56□□□□□ -0.88
CHD3-210ENST00000479080 CSNK1G2-AS1Q8NCQ2 148 aa9.56□□□□□ -0.88
CHD3-210ENST00000479080 ZMAT5Q9UDW3 170 aaKnown RBP9.56□□□□□ -0.88
CHD3-210ENST00000479080 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
CHD3-210ENST00000479080 CARHSP1Q9Y2V2 147 aaKnown RBP9.56□□□□□ -0.88
CHD3-210ENST00000479080 ZNF324O75467 553 aaPredicted RBP9.55□□□□□ -0.88
CHD3-210ENST00000479080 GCGP01275 180 aa9.55□□□□□ -0.88
CHD3-210ENST00000479080 LEPP41159 167 aa9.55□□□□□ -0.88
CHD3-210ENST00000479080 CDKN1BP46527 198 aa9.55□□□□□ -0.88
CHD3-210ENST00000479080 FAM74A3Q4VXF1 159 aa9.55□□□□□ -0.88
CHD3-210ENST00000479080 Q6AWC8 147 aa9.55□□□□□ -0.88
CHD3-210ENST00000479080 C1orf158Q8N1D5 194 aa9.55□□□□□ -0.88
CHD3-210ENST00000479080 SEC11CQ9BY50 192 aa9.55□□□□□ -0.88
CHD3-210ENST00000479080 NAT8Q9UHE5 227 aa9.55□□□□□ -0.88
CHD3-210ENST00000479080 LY96Q9Y6Y9 160 aa9.55□□□□□ -0.88
CHD3-210ENST00000479080 LOC102724200A0A096LPH7 203 aaPredicted RBP9.54□□□□□ -0.88
CHD3-210ENST00000479080 C7orf71A4D174 169 aa9.54□□□□□ -0.88
CHD3-210ENST00000479080 C19orf71A6NCJ1 209 aa9.54□□□□□ -0.88
CHD3-210ENST00000479080 F8W036 122 aa9.54□□□□□ -0.88
CHD3-210ENST00000479080 SH2D1AO60880 128 aa9.54□□□□□ -0.88
CHD3-210ENST00000479080 FRMD6-AS1P0C7T7 363 aa9.54□□□□□ -0.88
CHD3-210ENST00000479080 TMEM241Q24JQ0 296 aa9.54□□□□□ -0.88
CHD3-210ENST00000479080 SMUG1Q53HV7 270 aa9.54□□□□□ -0.88
CHD3-210ENST00000479080 SAPCD1Q5SSQ6 148 aa9.54□□□□□ -0.88
CHD3-210ENST00000479080 XCL2Q9UBD3 114 aa9.54□□□□□ -0.88
CHD3-210ENST00000479080 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
CHD3-210ENST00000479080 RNASE4P34096 147 aaKnown RBP9.53□□□□□ -0.88
CHD3-210ENST00000479080 MORN3Q6PF18 240 aaPredicted RBP9.53□□□□□ -0.88
CHD3-210ENST00000479080 ISOC2Q96AB3 205 aa9.53□□□□□ -0.88
CHD3-210ENST00000479080 SMIM12Q96EX1 92 aa9.53□□□□□ -0.88
CHD3-210ENST00000479080 NDFIP1Q9BT67 221 aa9.53□□□□□ -0.88
CHD3-210ENST00000479080 CSTL1Q9H114 145 aa9.53□□□□□ -0.88
CHD3-210ENST00000479080 TRAV12-3A0A0B4J271 114 aa9.52□□□□□ -0.89
CHD3-210ENST00000479080 PRM2P04554 102 aa9.52□□□□□ -0.89
CHD3-210ENST00000479080 GPX1P07203 203 aa9.52□□□□□ -0.89
CHD3-210ENST00000479080 MGST1P10620 155 aaKnown RBP9.52□□□□□ -0.89
CHD3-210ENST00000479080 PRR27Q6MZM9 219 aa9.52□□□□□ -0.89
CHD3-210ENST00000479080 TUBA4BQ9H853 241 aa9.52□□□□□ -0.89
CHD3-210ENST00000479080 MEGF8Q7Z7M0 2845 aa9.51□□□□□ -0.89
CHD3-210ENST00000479080 IGKV3D-20A0A0C4DH25 116 aa9.51□□□□□ -0.89
CHD3-210ENST00000479080 KIR2DL5BA0A0G2JN68 375 aa9.51□□□□□ -0.89
CHD3-210ENST00000479080 KIR2DL5BA0A0G2JPC4 375 aa9.51□□□□□ -0.89
CHD3-210ENST00000479080 PFN1P07737 140 aaKnown RBP9.51□□□□□ -0.89
CHD3-210ENST00000479080 TSPOP30536 169 aa9.51□□□□□ -0.89
CHD3-210ENST00000479080 RPL19P84098 196 aaKnown RBP9.51□□□□□ -0.89
CHD3-210ENST00000479080 ADIRFQ15847 76 aa9.51□□□□□ -0.89
CHD3-210ENST00000479080 KIR2DL5AQ8N109 375 aa9.51□□□□□ -0.89
CHD3-210ENST00000479080 KIR2DL5BQ8NHK3 375 aa9.51□□□□□ -0.89
CHD3-210ENST00000479080 NIPSNAP3BQ9BS92 247 aa9.51□□□□□ -0.89
CHD3-210ENST00000479080 RNASE7Q9H1E1 156 aaKnown RBP9.51□□□□□ -0.89
CHD3-210ENST00000479080 KRBOX1C9JBD0 128 aa9.5□□□□□ -0.89
CHD3-210ENST00000479080 ATP6V1G1O75348 118 aa9.5□□□□□ -0.89
CHD3-210ENST00000479080 INSP01308 110 aa9.5□□□□□ -0.89
CHD3-210ENST00000479080 AMBPP02760 352 aa9.5□□□□□ -0.89
CHD3-210ENST00000479080 ATRAIDQ6UW56 229 aa9.5□□□□□ -0.89
CHD3-210ENST00000479080 NUDT10Q8NFP7 164 aa9.5□□□□□ -0.89
CHD3-210ENST00000479080 NUDT11Q96G61 164 aa9.5□□□□□ -0.89
CHD3-210ENST00000479080 RETNQ9HD89 108 aa9.5□□□□□ -0.89
CHD3-210ENST00000479080 TRAV21A0A0B4J279 112 aa9.49□□□□□ -0.89
CHD3-210ENST00000479080 ANXA2RQ3ZCQ2 193 aa9.49□□□□□ -0.89
CHD3-210ENST00000479080 MUC21Q5SSG8 566 aa9.49□□□□□ -0.89
CHD3-210ENST00000479080 FAM162BQ5T6X4 162 aa9.49□□□□□ -0.89
CHD3-210ENST00000479080 ZNF705AQ6ZN79 300 aaPredicted RBP9.49□□□□□ -0.89
CHD3-210ENST00000479080 FAM231DQ6ZW35 169 aa9.49□□□□□ -0.89
CHD3-210ENST00000479080 TP53TG3Q9ULZ0 132 aa9.49□□□□□ -0.89
CHD3-210ENST00000479080 X6R8D5 127 aa9.49□□□□□ -0.89
CHD3-210ENST00000479080 FABP5P3A8MUU1 101 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 M0R036 132 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 APOC3P02656 99 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 APOC4P55056 127 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 NUTF2P61970 127 aaKnown RBP9.48□□□□□ -0.89
CHD3-210ENST00000479080 DEFB135Q30KP9 77 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 SBSPONQ8IVN8 264 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 CLRN3Q8NCR9 226 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 C20orf144Q9BQM9 153 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 OSTCQ9NRP0 149 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 V9GYV3 84 aa9.48□□□□□ -0.89
CHD3-210ENST00000479080 TYMSP04818 313 aa9.47□□□□□ -0.89
CHD3-210ENST00000479080 AZU1P20160 251 aa9.47□□□□□ -0.89
CHD3-210ENST00000479080 PNRC1Q12796 327 aaPredicted RBP9.47□□□□□ -0.89
CHD3-210ENST00000479080 TDRG1Q3Y452 100 aa9.47□□□□□ -0.89
CHD3-210ENST00000479080 RNF212Q495C1 297 aa9.47□□□□□ -0.89
CHD3-210ENST00000479080 SFRP2Q96HF1 295 aa9.47□□□□□ -0.89
CHD3-210ENST00000479080 LINC00467Q9BRT7 94 aa9.47□□□□□ -0.89
CHD3-210ENST00000479080 IGHV1OR15-1A0A075B7D0 117 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 TMSB15BA0A087X1C1 80 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 PLAC8L1A1L4L8 177 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 GNRH2O43555 120 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 GZMBP10144 247 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 DEFA6Q01524 100 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms