RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 RNF125Q96EQ8 232 aa11□□□□□ -0.65
CCDC78-210ENST00000478979 LY6LH3BQJ8 138 aa11□□□□□ -0.65
CCDC78-210ENST00000478979 Q6AWC8 147 aa11□□□□□ -0.65
CCDC78-210ENST00000478979 TM2D2Q9BX73 214 aa11□□□□□ -0.65
CCDC78-210ENST00000478979 UBTD1Q9HAC8 227 aa11□□□□□ -0.65
CCDC78-210ENST00000478979 HHLA3Q9XRX5 114 aa11□□□□□ -0.65
CCDC78-210ENST00000478979 ZFP36P26651 326 aaKnown RBP11□□□□□ -0.65
CCDC78-210ENST00000478979 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
CCDC78-210ENST00000478979 PSG8Q9UQ74 426 aa11□□□□□ -0.65
CCDC78-210ENST00000478979 IGHV3OR16-10A0A075B7F0 116 aa10.99□□□□□ -0.65
CCDC78-210ENST00000478979 GTSCR1Q86UQ5 136 aa10.99□□□□□ -0.65
CCDC78-210ENST00000478979 PIFOQ8TCI5 191 aa10.99□□□□□ -0.65
CCDC78-210ENST00000478979 ZNF48Q96MX3 618 aaPredicted RBP10.99□□□□□ -0.65
CCDC78-210ENST00000478979 IGHV3-66A0A0C4DH42 116 aa10.99□□□□□ -0.65
CCDC78-210ENST00000478979 ODF1Q14990 250 aa10.99□□□□□ -0.65
CCDC78-210ENST00000478979 GAGE13Q4V321 117 aa10.99□□□□□ -0.65
CCDC78-210ENST00000478979 CKS2P33552 79 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 ZNF491Q8N8L2 437 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 CFHR4Q92496 578 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 C8orf49Q96NF6 230 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 C20orf78Q9BR46 151 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 FLNCQ14315 2725 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 CSPG4Q6UVK1 2322 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 KLRB1Q12918 225 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 ECSCRQ19T08 205 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 TMEM75Q8N9X5 138 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 MSRB2Q9Y3D2 182 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 AGRNO00468 2067 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 TRBV6-1A0A0K0K1D8 114 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 C5orf64Q2M2E5 130 aa10.98□□□□□ -0.65
CCDC78-210ENST00000478979 PKD1L2Q7Z442 2459 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 IGHV3-49A0A0A0MS15 119 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 NPIPB5A8MRT5 1133 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
CCDC78-210ENST00000478979 PRO0461Q9UI25 63 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 PRSS1P07477 247 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 HLA-DMBP28068 263 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 C12orf74Q32Q52 190 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 Q8TAT8 98 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 ZNF502Q8TBZ5 544 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 ZMAT4Q9H898 229 aa10.97□□□□□ -0.65
CCDC78-210ENST00000478979 TRBV19A0A075B6N1 114 aa10.96□□□□□ -0.65
CCDC78-210ENST00000478979 IGKV2-40A0A087WW87 121 aaPredicted RBP10.96□□□□□ -0.65
CCDC78-210ENST00000478979 IGKV2D-40P01614 121 aaPredicted RBP10.96□□□□□ -0.65
CCDC78-210ENST00000478979 IGKCP01834 107 aa10.96□□□□□ -0.65
CCDC78-210ENST00000478979 ZC2HC1BQ5TFG8 222 aa10.96□□□□□ -0.65
CCDC78-210ENST00000478979 SHANK2-AS3Q9BTD1 123 aa10.96□□□□□ -0.65
CCDC78-210ENST00000478979 A0A1B0GWB2 263 aa10.96□□□□□ -0.66
CCDC78-210ENST00000478979 PPIFP30405 207 aaKnown RBP10.96□□□□□ -0.66
CCDC78-210ENST00000478979 LY6G5BQ8NDX9 201 aa10.96□□□□□ -0.66
CCDC78-210ENST00000478979 TMEM14CQ9P0S9 112 aa10.96□□□□□ -0.66
CCDC78-210ENST00000478979 CACNA1AO00555 2505 aa10.96□□□□□ -0.66
CCDC78-210ENST00000478979 FANCD2OSQ96PS1 177 aa10.95□□□□□ -0.66
CCDC78-210ENST00000478979 LEPP41159 167 aa10.95□□□□□ -0.66
CCDC78-210ENST00000478979 PVRIGQ6DKI7 326 aa10.95□□□□□ -0.66
CCDC78-210ENST00000478979 LINC00527Q9UJ94 153 aa10.95□□□□□ -0.66
CCDC78-210ENST00000478979 APOMO95445 188 aa10.95□□□□□ -0.66
CCDC78-210ENST00000478979 SIGLEC15Q6ZMC9 328 aa10.95□□□□□ -0.66
CCDC78-210ENST00000478979 C8orf86Q6ZUL3 223 aa10.95□□□□□ -0.66
CCDC78-210ENST00000478979 FOXC2Q99958 501 aa10.95□□□□□ -0.66
CCDC78-210ENST00000478979 ZFYVE26Q68DK2 2539 aa10.95□□□□□ -0.66
CCDC78-210ENST00000478979 CFAP46Q8IYW2 2715 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 MYO18BQ8IUG5 2567 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 EVI2AP22794 236 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 PRTN3P24158 256 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 MAPKAPK5-AS1Q8N8E1 139 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 SYT8Q8NBV8 401 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 OR11H6Q8NGC7 330 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 POLQO75417 2590 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 H3BRN7 92 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 FCER1GP30273 86 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 PSMG4Q5JS54 123 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 C21orf62Q9NYP8 219 aa10.94□□□□□ -0.66
CCDC78-210ENST00000478979 SRSF1Q07955 248 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCDC78-210ENST00000478979 TWIST1Q15672 202 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 RRN3P1Q2M238 152 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 TTC9CQ8N5M4 171 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 ZNF418Q8TF45 676 aaPredicted RBP10.93□□□□□ -0.66
CCDC78-210ENST00000478979 GAS8-AS1O95177 125 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 SPINK8P0C7L1 97 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 MFAP4P55083 255 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 CDIP1Q9H305 208 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 TMEM8BA6NDV4 472 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 LINC01548A6NM66 108 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 SH2D1AO60880 128 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 DPM2O94777 84 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 FBXL19-AS1Q494R0 122 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 MAP1LC3AQ9H492 121 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 TMEM160Q9NX00 188 aa10.93□□□□□ -0.66
CCDC78-210ENST00000478979 FOXI1Q12951 378 aa10.92□□□□□ -0.66
CCDC78-210ENST00000478979 C11orf71Q6IPW1 123 aa10.92□□□□□ -0.66
CCDC78-210ENST00000478979 LCNL1Q6ZST4 164 aa10.92□□□□□ -0.66
CCDC78-210ENST00000478979 DOPEY2Q9Y3R5 2298 aa10.92□□□□□ -0.66
CCDC78-210ENST00000478979 G3V318 75 aa10.92□□□□□ -0.66
CCDC78-210ENST00000478979 MT-ATP8P03928 68 aa10.92□□□□□ -0.66
CCDC78-210ENST00000478979 TMEM219Q86XT9 240 aa10.92□□□□□ -0.66
CCDC78-210ENST00000478979 HIST1H4GQ99525 98 aa10.92□□□□□ -0.66
CCDC78-210ENST00000478979 AAMDCQ9H7C9 122 aa10.92□□□□□ -0.66
CCDC78-210ENST00000478979 PIEZO1Q92508 2521 aa10.91□□□□□ -0.66
CCDC78-210ENST00000478979 TRAV40A0A0B4J280 105 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms