RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 COX8CQ7Z4L0 72 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 ORMDL3Q8N138 153 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 DEFB125Q8N687 156 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 OR4X2Q8NGF9 303 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 ZC2HC1AQ96GY0 325 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 TIMD4Q96H15 378 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 MRPL36Q9P0J6 103 aaKnown RBP3.31□□□□□ -1.88
GPNMB-210ENST00000478451 ZNRD1Q9P1U0 126 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 CTSZQ9UBR2 303 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 CADP27708 2225 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 SPEGQ15772 3267 aa3.31□□□□□ -1.88
GPNMB-210ENST00000478451 ARFGEF3Q5TH69 2177 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 CCL25O15444 150 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 NDUFA3O95167 84 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 IGHV3-48P01763 117 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 IL4P05112 153 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 ARMS2P0C7Q2 107 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 HSD52Q0P140 79 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 SRSF6Q13247 344 aaKnown RBP3.3□□□□□ -1.88
GPNMB-210ENST00000478451 DIAPH2-AS1Q14236 149 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 MAJINQ3KP22 176 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 TMEM97Q5BJF2 176 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 BVES-AS1Q5T3Y7 98 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 SIGLEC15Q6ZMC9 328 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 EXOC3-AS1Q8N2X6 119 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 KIR3DL3Q8N743 410 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 ZNF491Q8N8L2 437 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 NPBQ8NG41 125 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 ZNF414Q96IQ9 312 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 PRELID3AQ96N28 172 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 FBXL15Q9H469 300 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 MAP1LC3AQ9H492 121 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 NXT2Q9NPJ8 142 aaKnown RBP3.3□□□□□ -1.88
GPNMB-210ENST00000478451 DPM3Q9P2X0 92 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 ONECUT1Q9UBC0 465 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 SMPXQ9UHP9 88 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 RABAC1Q9UI14 185 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 U3KQK5 164 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 FREM2Q5SZK8 3169 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 NCOR1O75376 2440 aa3.3□□□□□ -1.88
GPNMB-210ENST00000478451 TRAV8-1A0A0A6YYK1 113 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 IGHV3-21A0A0B4J1V1 117 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 IGHV3-72A0A0B4J1Y9 119 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 C7orf71A4D174 169 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 RBAKDNA6NC62 111 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 D6R8Y8 96 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 E7EQL1 145 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 H0Y8G0 127 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 LY6LH3BQJ8 138 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 H3BRM9 83 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 K7EIM0 57 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 TAX1BP3O14907 124 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 ATP5LO75964 103 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 IGKV1-17P01599 117 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 HLA-DRB4P13762 266 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 COX7A1P24310 79 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 CNTFRP26992 372 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 FCGR2BP31994 310 aaPredicted RBP3.29□□□□□ -1.88
GPNMB-210ENST00000478451 CKS2P33552 79 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 HES1Q14469 280 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 C5orf64Q2M2E5 130 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 MINOS1Q5TGZ0 78 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 FAM104BQ5XKR9 115 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 ZNF562Q6V9R5 426 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 LINC00322Q6ZN03 302 aaPredicted RBP3.29□□□□□ -1.88
GPNMB-210ENST00000478451 TTC9CQ8N5M4 171 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 FER1L6-AS1Q8NA97 138 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 LY6G5BQ8NDX9 201 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 OR11H6Q8NGC7 330 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 OR5A1Q8NGJ0 315 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 PIFOQ8TCI5 191 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 ARPC1AQ92747 370 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 VPS25Q9BRG1 176 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 SLC50A1Q9BRV3 221 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 TPPP3Q9BW30 176 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 C21orf62Q9NYP8 219 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 TIMM8BQ9Y5J9 83 aaPredicted RBP3.29□□□□□ -1.88
GPNMB-210ENST00000478451 MINOS1-NBL1R4GNA1 71 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 HLA-DRB4X5D2U9 266 aa3.29□□□□□ -1.88
GPNMB-210ENST00000478451 URB1O60287 2271 aaKnown RBP3.28□□□□□ -1.88
GPNMB-210ENST00000478451 ICE1Q9Y2F5 2266 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 FRYQ5TBA9 3013 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 DSPP15924 2871 aaKnown RBP3.28□□□□□ -1.88
GPNMB-210ENST00000478451 IGLV11-55A0A075B6I3 123 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 MUC21A0A0G2JKD1 596 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 MUC21A0A140T8X8 626 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 FABP5P3A8MUU1 101 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 H3BTX0 84 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 MRPS12O15235 138 aaKnown RBP3.28□□□□□ -1.88
GPNMB-210ENST00000478451 ATP6V0E1O15342 81 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 SH2D1AO60880 128 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 FCN3O75636 299 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 TSHBP01222 138 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 APELAP0DMC3 54 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 IGHV4-31P0DP07 118 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 FBXL19-AS1Q494R0 122 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 MUC21Q5SSG8 566 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 LYZL1Q6UWQ5 148 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 BOD1L2Q8IYS8 172 aa3.28□□□□□ -1.88
GPNMB-210ENST00000478451 MAPKAPK5-AS1Q8N8E1 139 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms