RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 H7BYZ3 331 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 GYPBP06028 91 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 NDUFA6P56556 154 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 BASP1P80723 227 aaKnown RBP-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 MRPS15P82914 257 aaKnown RBP-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 IZUMO2Q6UXV1 221 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 C3orf62Q6ZUJ4 267 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 TMED4Q7Z7H5 227 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 STX19Q8N4C7 294 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 TEX29Q8N6K0 151 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 C5orf56Q8N8D9 126 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 TMEM229BQ8NBD8 167 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 PRELID3AQ96N28 172 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 MCEEQ96PE7 176 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 CIB3Q96Q77 187 aaPredicted RBP-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 HOPXQ9BPY8 73 aaPredicted RBP-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 MRPL36Q9P0J6 103 aaKnown RBP-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 NUBP2Q9Y5Y2 271 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 TRAPPC8Q9Y2L5 1435 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 TTC28Q96AY4 2481 aa-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 TNS1Q9HBL0 1735 aaKnown RBP-0.07□□□□□ -2.42
SYCP3-205ENST00000478238 TCOF1Q13428 1488 aaKnown RBP-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 ARL5CA6NH57 179 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 CDC42EP2O14613 210 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 IGKCP01834 107 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 IL7P13232 177 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 TPT1P13693 172 aaKnown RBP-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 S100A11P31949 105 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 SDC2P34741 201 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 CRYBA4P53673 196 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 TCTAP57738 103 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 MAXP61244 160 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 IQCJQ1A5X6 159 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 DCUN1D2Q6PH85 259 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 LINC00305Q7Z4B0 112 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 TCTEX1D1Q8N7M0 179 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 PROK2Q9HC23 129 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 GID8Q9NWU2 228 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 MRPL35Q9NZE8 188 aaKnown RBP-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 LAMTOR3Q9UHA4 124 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 SYNMO15061 1565 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 PLXNA2O75051 1894 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 XIRP1Q702N8 1843 aaKnown RBP-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 ABCA12Q86UK0 2595 aa-0.08□□□□□ -2.42
SYCP3-205ENST00000478238 CACNA1HO95180 2353 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 KIDINS220Q9ULH0 1771 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 POLQO75417 2590 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 FAM135BQ49AJ0 1406 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 YTHDC2Q9H6S0 1430 aaKnown RBP-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 LOC107986453A0A1B0GWG9 222 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 TMEM30CPA0ZSE6 113 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 MAP1LC3B2A6NCE7 125 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 HIGD1CA8MV81 97 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 TMEM238C9JI98 176 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 TPST1O60507 370 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 EDF1O60869 148 aaKnown RBP-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 SPINK1P00995 79 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 IGF2P01344 180 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 SAA1P0DJI8 122 aaPredicted RBP-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 BCL2P10415 239 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 SLC25A4P12235 298 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 G0S2P27469 103 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 SERPINB1P30740 379 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 GTF2A1P52655 376 aaPredicted RBP-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 Q5BKY6 102 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 C3orf33Q6P1S2 294 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 LYPD5Q6UWN5 251 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 HRCT1Q6UXD1 115 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 VMO1Q7Z5L0 202 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 DEFB132Q7Z7B7 95 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 OR8J3Q8NGG0 315 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 CDC26Q8NHZ8 85 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 ISOC1Q96CN7 298 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 BIN3Q9NQY0 253 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 MPC1Q9Y5U8 109 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 KIF13AQ9H1H9 1805 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 MED13LQ71F56 2210 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 EIF3AQ14152 1382 aaKnown RBP-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 LRP5O75197 1615 aa-0.09□□□□□ -2.42
SYCP3-205ENST00000478238 CDK12Q9NYV4 1490 aaPredicted RBP-0.1□□□□□ -2.42
SYCP3-205ENST00000478238 PIEZO1Q92508 2521 aa-0.1□□□□□ -2.42
SYCP3-205ENST00000478238 UBR5O95071 2799 aaPredicted RBP-0.1□□□□□ -2.42
SYCP3-205ENST00000478238 UNC79Q9P2D8 2635 aa-0.1□□□□□ -2.42
SYCP3-205ENST00000478238 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 TRAV13-1A0A0B4J241 112 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 A0A0G2JMM0 328 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 TRBV27A0A0K0K1C4 114 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 TMEM189A5PLL7 270 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 PPP5D1E7EU14 171 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 H3BMG7 143 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 M0QZK8 103 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 MPC1LP0DKB6 136 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 CRYGSP22914 178 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 GNG10P50151 68 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 DNAJB13P59910 316 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 TRIQKQ629K1 86 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 MORN4Q8NDC4 146 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 OR51A4Q8NGJ6 313 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 TRAPPC2LQ9UL33 140 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms