RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PRRC2BQ5JSZ5 2229 aaKnown RBP2.54□□□□□ -2
FNDC3B-209ENST00000478016 WDFY4Q6ZS81 3184 aa2.54□□□□□ -2
FNDC3B-209ENST00000478016 C5orf42Q9H799 3197 aa2.54□□□□□ -2
FNDC3B-209ENST00000478016 COL4A6Q14031 1691 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 TET1Q8NFU7 2136 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 DYSFO75923 2080 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 DOCK4Q8N1I0 1966 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 TRAV1-1A0A0B4J248 108 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 TRAV17A0A0B4J275 112 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 IGHV3-38A0A0C4DH36 116 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 SCGB1C2P0DMR2 95 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 IL9P15248 144 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 KRTAP24-1Q3LI83 254 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 ASB16-AS1Q495Z4 193 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 PSMG4Q5JS54 123 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 ADAMTSL4-AS1Q5T5F5 129 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 Q6ZQT7 251 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 LINC00173Q6ZV60 143 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 Q8N8P6 123 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 C10orf105Q8TEF2 133 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 TSKUQ8WUA8 353 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 TVP23CQ96ET8 276 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 ODF3Q96PU9 254 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 CHCHD5Q9BSY4 110 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 FGFBP2Q9BYJ0 223 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 CYTL1Q9NRR1 136 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 RALGAPA2Q2PPJ7 1873 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 MUC6Q6W4X9 2439 aa2.53□□□□□ -2
FNDC3B-209ENST00000478016 MYO15AQ9UKN7 3530 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 BRWD1Q9NSI6 2320 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 IGLV3-10A0A075B6K4 115 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 IGHV1-45A0A0A0MS14 117 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 IGHV7-81A0A0B4J1V7 117 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 TRGV8A0A0C4DH27 118 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 A0A0G2JND7 137 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 hADV29S1A0JD25 119 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 A6NN06 94 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 CREBL2O60519 120 aaPredicted RBP2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 SLC25A14O95258 325 aaPredicted RBP2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 LY6G6DO95868 133 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 TSHBP01222 138 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 PRM2P04554 102 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 CXCL8P10145 99 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 LSM3P62310 102 aaKnown RBP2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 MPV17LQ2QL34 196 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 PYDC2Q56P42 97 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 MIC13Q5XKP0 118 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 SDIM1Q6ZPB5 146 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 C2orf91Q6ZV80 131 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 SCXQ7RTU7 201 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 ZNF584Q8IVC4 421 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 CD177Q8N6Q3 437 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 SERP2Q8N6R1 65 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 C3orf56Q8N813 242 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 OR8B3Q8NGG8 313 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 WFDC5Q8TCV5 224 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 PGLYRP2Q96PD5 576 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 TRGV9Q99603 122 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 MGST2Q99735 147 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 SCRT2Q9NQ03 307 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 Q9Y3F1 56 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 F11RQ9Y624 299 aaKnown RBP2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 DOCK8Q8NF50 2099 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 TRIP12Q14669 1992 aaPredicted RBP2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 PATJQ8NI35 1801 aa2.52□□□□□ -2.01
FNDC3B-209ENST00000478016 NCOR1O75376 2440 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 IGHV3OR15-7A0A075B7D8 119 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 TRAV14DV4A0A0A6YYC5 116 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 MDFIC2A0A1B0GVS7 189 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 KRTAP4-16G5E9R7 235 aaPredicted RBP2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 CCL16O15467 120 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 BCE1O60756 84 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 SMIM13P0DJ93 91 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 INAFM2P0DMQ5 153 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 COX8AP10176 69 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 FAUP35544 74 aaKnown RBP2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 SNRPFP62306 86 aaKnown RBP2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 FUT5Q11128 374 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 RSPO1Q2MKA7 263 aaPredicted RBP2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 FAM53AQ6NSI3 398 aaPredicted RBP2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 PATE2Q6UY27 113 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 CSNK1G2-AS1Q8NCQ2 148 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 CCL4L1Q8NHW4 92 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 FAM213BQ8TBF2 198 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 AQP3Q92482 292 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 RNASE6Q93091 150 aaKnown RBP2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 CXCL16Q9H2A7 254 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 PDCD11Q14690 1871 aaKnown RBP2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 MYO9BQ13459 2157 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 USP34Q70CQ2 3546 aa2.51□□□□□ -2.01
FNDC3B-209ENST00000478016 DMDP11532 3685 aa2.5□□□□□ -2.01
FNDC3B-209ENST00000478016 TRIOO75962 3097 aa2.5□□□□□ -2.01
FNDC3B-209ENST00000478016 FXYD6-FXYD2A0A087WZ82 144 aa2.5□□□□□ -2.01
FNDC3B-209ENST00000478016 IGKV6D-21A0A0A0MT36 114 aa2.5□□□□□ -2.01
FNDC3B-209ENST00000478016 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.5□□□□□ -2.01
FNDC3B-209ENST00000478016 PMS2P5A8MQ11 134 aa2.5□□□□□ -2.01
FNDC3B-209ENST00000478016 PEX7O00628 323 aa2.5□□□□□ -2.01
FNDC3B-209ENST00000478016 IGHV3-48P01763 117 aa2.5□□□□□ -2.01
FNDC3B-209ENST00000478016 ACYP1P07311 99 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms