RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 UBE2L3P68036 154 aaKnown RBP9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 VKORC1Q9BQB6 163 aa9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 TRGV8A0A0C4DH27 118 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 WNT9BO14905 357 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 EBI3Q14213 229 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 GTSCR1Q86UQ5 136 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 NUP37Q8NFH4 326 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 IGF2RP11717 2491 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 KLRB1Q12918 225 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 Q5XG85 94 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 HRCT1Q6UXD1 115 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 AMN1Q8IY45 258 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 MAPKAPK5-AS1Q8N8E1 139 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 MRPL20Q9BYC9 149 aaKnown RBP9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 AAMDCQ9H7C9 122 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 CALYQ9NYX4 217 aa9.94□□□□□ -0.82
RTFDC1-207ENST00000477573 SPTA1P02549 2419 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 FAM236AA0A1B0GUQ0 79 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 FAM236BA0A1B0GV22 79 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 SRRM5B3KS81 715 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 COX7CP15954 63 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 C4orf26Q17RF5 130 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 MSMPQ1L6U9 139 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 SIGLEC15Q6ZMC9 328 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 DPH3Q96FX2 82 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 FMC1Q96HJ9 113 aa9.93□□□□□ -0.82
RTFDC1-207ENST00000477573 LINC01546A6NGU7 62 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 LGALS9O00182 355 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 OVOL1O14753 267 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 PSPNO60542 156 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 DUTP33316 252 aaKnown RBP9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 SRSF2Q01130 221 aaKnown RBP9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 SPRY3O43610 288 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 CD3EP07766 207 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 PRDX2P32119 198 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 DTX2Q86UW9 622 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 ORMDL3Q8N138 153 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 V9GYY9 64 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 PLCE1Q9P212 2302 aa9.92□□□□□ -0.82
RTFDC1-207ENST00000477573 C17orf98A8MV24 154 aa9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 FAM167A-AS1Q96KT0 104 aa9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 PCNX1Q96RV3 2341 aa9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 USF3Q68DE3 2245 aa9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 OVOL3O00110 214 aa9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 MYCNOSP40205 109 aa9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 BRWD1-AS2P59051 145 aa9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 C22orf34Q6ZV56 151 aa9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 NTN5Q8WTR8 489 aaPredicted RBP9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 ITLN1Q8WWA0 313 aa9.91□□□□□ -0.82
RTFDC1-207ENST00000477573 HLA-DMBP28068 263 aa9.9□□□□□ -0.82
RTFDC1-207ENST00000477573 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-207ENST00000477573 KLK5Q9Y337 293 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-207ENST00000477573 TRGV11A0A075B6L2 103 aa9.9□□□□□ -0.83
RTFDC1-207ENST00000477573 LOC389332A0A1B0GUA5 103 aa9.9□□□□□ -0.83
RTFDC1-207ENST00000477573 PRSS1P07477 247 aa9.9□□□□□ -0.83
RTFDC1-207ENST00000477573 ZNF672Q499Z4 452 aaPredicted RBP9.9□□□□□ -0.83
RTFDC1-207ENST00000477573 TMEM155Q4W5P6 130 aa9.9□□□□□ -0.83
RTFDC1-207ENST00000477573 JPT2Q9H910 190 aa9.9□□□□□ -0.83
RTFDC1-207ENST00000477573 RNF7Q9UBF6 113 aa9.9□□□□□ -0.83
RTFDC1-207ENST00000477573 C12orf77C9JDV5 145 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 D6R8Y8 96 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 SPINT2O43291 252 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 LHBP01229 141 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 TRACP01848 142 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 BSPH1Q075Z2 132 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 NDUFA11Q86Y39 141 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 CD177Q8N6Q3 437 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 RNF125Q96EQ8 232 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 LINC00477Q96M19 166 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 C1orf43Q9BWL3 253 aa9.89□□□□□ -0.83
RTFDC1-207ENST00000477573 IGHV1-46P01743 117 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 PLNP26678 52 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 ZNF415Q09FC8 603 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 PRORYQ9H606 182 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 POLEQ07864 2286 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 IGKV1D-17A0A075B6S4 117 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 H3BMM0 161 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 ARMS2P0C7Q2 107 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 EFNA4P52798 201 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 ZNF56Q15929 161 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 UBE2WQ96B02 151 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 PAXXQ9BUH6 204 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 CACNA1DQ01668 2161 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 ICE1Q9Y2F5 2266 aa9.88□□□□□ -0.83
RTFDC1-207ENST00000477573 FAM104BQ5XKR9 115 aa9.87□□□□□ -0.83
RTFDC1-207ENST00000477573 UBALD1Q8TB05 177 aa9.87□□□□□ -0.83
RTFDC1-207ENST00000477573 HOXA4Q00056 320 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-207ENST00000477573 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
RTFDC1-207ENST00000477573 TET2Q6N021 2002 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-207ENST00000477573 Q71RC1 249 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-207ENST00000477573 FOXC2Q99958 501 aa9.87□□□□□ -0.83
RTFDC1-207ENST00000477573 FOXA2Q9Y261 457 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-207ENST00000477573 PIEZO1Q92508 2521 aa9.86□□□□□ -0.83
RTFDC1-207ENST00000477573 C17orf100A8MU93 164 aa9.86□□□□□ -0.83
RTFDC1-207ENST00000477573 ACYP1P07311 99 aa9.86□□□□□ -0.83
RTFDC1-207ENST00000477573 P0DMU3 169 aa9.86□□□□□ -0.83
RTFDC1-207ENST00000477573 FAM231AP0DMU4 169 aa9.86□□□□□ -0.83
RTFDC1-207ENST00000477573 FAM231CP0DMU5 169 aa9.86□□□□□ -0.83
RTFDC1-207ENST00000477573 COL8A2P25067 703 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms