RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TMEM183AQ8IXX5 376 aa4.49□□□□□ -1.69
RTFDC1-206ENST00000477485 Q8TAT8 98 aa4.49□□□□□ -1.69
RTFDC1-206ENST00000477485 MRPL53Q96EL3 112 aaKnown RBP4.49□□□□□ -1.69
RTFDC1-206ENST00000477485 GGACTQ9BVM4 153 aa4.49□□□□□ -1.69
RTFDC1-206ENST00000477485 FAM30AQ9NZY2 134 aa4.49□□□□□ -1.69
RTFDC1-206ENST00000477485 FLVCR2Q9UPI3 526 aa4.49□□□□□ -1.69
RTFDC1-206ENST00000477485 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
RTFDC1-206ENST00000477485 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 IGHV3-16A0A0C4DH30 117 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 C7orf66A4D0T2 115 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 CCDC160A6NGH7 325 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 LECT2O14960 151 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 ZNF253O75346 499 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 MBPP02686 304 aaPredicted RBP4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 FGF7P21781 194 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 TMBIM6P55061 237 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 TAS2R30P59541 319 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 S100A10P60903 97 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 TRIQKQ629K1 86 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 FAM159AQ6UWV7 190 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 C9orf47Q6ZRZ4 202 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 ZFAND2AQ8N6M9 145 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 OR4C5Q8NGB2 326 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 DEFB104AQ8WTQ1 72 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 SLIRPQ9GZT3 109 aaKnown RBP4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 C20orf85Q9H1P6 137 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 SLC39A9Q9NUM3 307 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 UQCC1Q9NVA1 299 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 V9GYH0 126 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 VPS13BQ7Z7G8 4022 aa4.48□□□□□ -1.69
RTFDC1-206ENST00000477485 TRGV11A0A075B6L2 103 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 LRCOL1A6NCL2 159 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 C5orf51A6NDU8 294 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 FAM24AA6NFZ4 105 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 KRTAP29-1A8MX34 341 aaPredicted RBP4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 H3BMQ9 156 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 NDUFB6O95139 128 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 NDUFB4O95168 129 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 OR10J4P0C629 311 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 CRISP2P16562 243 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 CSN1S1P47710 185 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 ZNF138P52744 262 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 SERTAD4-AS1Q5TG53 156 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 OR10G4Q8NGN3 311 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 FAM19A4Q96LR4 140 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 TMEM14CQ9P0S9 112 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 ZNF492Q9P255 531 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 RPH3ALQ9UNE2 315 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 PLA2G2DQ9UNK4 145 aa4.47□□□□□ -1.69
RTFDC1-206ENST00000477485 TRAV4A0A0B4J268 109 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 NAP1L6A6NFF2 107 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 NMBP08949 121 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 PVALBP20472 110 aaPredicted RBP4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 RPL29P47914 159 aaKnown RBP4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 HBG1P69891 147 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 HBG2P69892 147 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 PDE6HQ13956 83 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 LINC01620Q4KN68 170 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 GCSAMLQ5JQS6 135 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 SPANXN2Q5MJ10 180 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 SH2D6Q7Z4S9 175 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 STX12Q86Y82 276 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 DEDD2Q8WXF8 326 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 BCL7BQ9BQE9 202 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 SPXQ9BT56 116 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 SLC25A2Q9BXI2 301 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 WDR83OSQ9Y284 106 aa4.46□□□□□ -1.7
RTFDC1-206ENST00000477485 IGHV3-73A0A0B4J1V6 119 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 CENPXA8MT69 81 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 IBA57-AS1B1ANH7 110 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 OR7C2O60412 319 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 NBEAP1P0C6P0 100 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 SULT1A1P50225 295 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 RANP62826 216 aaKnown RBP4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 BAK1Q16611 211 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 LINC01556Q5JQF7 62 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 MIR17HGQ75NE6 70 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 IQCF2Q8IXL9 164 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 THAP6Q8TBB0 222 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 PHYHIPLQ96FC7 376 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 HYLS1Q96M11 299 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 PRADC1Q9BSG0 188 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 TM2D2Q9BX73 214 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 OR51M1Q9H341 326 aa4.45□□□□□ -1.7
RTFDC1-206ENST00000477485 IGSF23A1L1A6 192 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 RBFOX3A6NFN3 312 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 FBLL1A6NHQ2 334 aaKnown RBP4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 F6UZH7 168 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 M0R2P5 195 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 GNRH2O43555 120 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 EIF4EBP3O60516 100 aaPredicted RBP4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 C1QBP02746 253 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 PFN1P07737 140 aaKnown RBP4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 S100A11P31949 105 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 UBE2L3P68036 154 aaKnown RBP4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 WFDC2Q14508 124 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 ZNF266Q14584 549 aa4.44□□□□□ -1.7
RTFDC1-206ENST00000477485 SCXQ7RTU7 201 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms