RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 DYNLT1P63172 113 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 ODF3L1Q8IXM7 274 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 IL36BQ9NZH7 164 aa4.43□□□□□ -1.7
SPTLC3-205ENST00000476791 RPL30P62888 115 aaKnown RBP4.42□□□□□ -1.7
SPTLC3-205ENST00000476791 LINC01554Q52M75 96 aa4.42□□□□□ -1.7
SPTLC3-205ENST00000476791 NKAPP1Q8N9T2 125 aa4.42□□□□□ -1.7
SPTLC3-205ENST00000476791 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
SPTLC3-205ENST00000476791 CHCHD10Q8WYQ3 142 aaPredicted RBP4.42□□□□□ -1.7
SPTLC3-205ENST00000476791 ZNF714Q96N38 554 aa4.42□□□□□ -1.7
SPTLC3-205ENST00000476791 HEATR5BQ9P2D3 2071 aa4.42□□□□□ -1.7
SPTLC3-205ENST00000476791 ESPL1Q14674 2120 aa4.42□□□□□ -1.7
SPTLC3-205ENST00000476791 MYMXA0A1B0GTQ4 84 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 NPYP01303 97 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 IGHV4-31P0DP07 118 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 FUSP35637 526 aaKnown RBP eCLIP4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 DYNLT3P51808 116 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 GUSBP11Q6P575 273 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 DDX60LQ5H9U9 1706 aaKnown RBP4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 TOGARAM1Q9Y4F4 1720 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 TRBV5-3A0A0A0MS03 114 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 IQCF6A8MYZ5 107 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 CRIP2P52943 208 aaPredicted RBP4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 KIAA0087Q14695 138 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 LINC00643Q86TS7 51 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 MDP1Q86V88 176 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 DIRC1Q969H9 104 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 C18orf12Q96KH6 178 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 TRGV9Q99603 122 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 LOC285556D6RIA3 1793 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 DOT1LQ8TEK3 1739 aa4.41□□□□□ -1.7
SPTLC3-205ENST00000476791 ZFHX3Q15911 3703 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 TRBV7-1A0A0A6YYK4 115 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 IGKV1-12A0A0C4DH73 117 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 PINLYPA6NC86 204 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 C12orf77C9JDV5 145 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 WISP3O95389 354 aaPredicted RBP4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 IGKV1D-12P01611 117 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 RNASE4P34096 147 aaKnown RBP4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 NCBP2P52298 156 aaKnown RBP eCLIP4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 LMO4P61968 165 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 ATP1A1-AS1Q5TC04 95 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 C7orf65Q6ZTY9 151 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 NPCDR1Q9BY65 106 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 NRXN2Q9P2S2 1712 aa4.4□□□□□ -1.7
SPTLC3-205ENST00000476791 CD163L1Q9NR16 1453 aa4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 IGHV6-1A0A0B4J1U7 121 aa4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 NPPCP23582 126 aa4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 CRYBA2P53672 197 aa4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 FXYD6P3P58550 94 aa4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 KRTAP10-2P60368 255 aa4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 RPS21P63220 83 aaKnown RBP4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 RHOHQ15669 191 aa4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 CRIP3Q6Q6R5 217 aa4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 NUP37Q8NFH4 326 aa4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 MDC1Q14676 2089 aaKnown RBP4.4□□□□□ -1.71
SPTLC3-205ENST00000476791 TRBV25-1A0A075B6N4 114 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 IGHV1OR21-1A0A087WYE8 117 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 FAM223BA6NKX1 122 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 A6NN06 94 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 C17orf51A8MQB3 221 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 H3BMM0 161 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 SPINK4O60575 86 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 IGHV3-9P01782 118 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 Q6P435 159 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 C18orf65Q6ZTR6 163 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 UBE2WQ96B02 151 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 FAM3DQ96BQ1 224 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 EML5Q05BV3 1969 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 PCNX2A6NKB5 2137 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 IBA57-AS1B1ANH7 110 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 IGLV3-27P01718 113 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 RPS18P62269 152 aaKnown RBP4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 UBE2BP63146 152 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 SUPT4H1P63272 117 aaKnown RBP4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 TMEM170BQ5T4T1 132 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 ABHD14BQ96IU4 210 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 TTTY13Q9BZ97 58 aa4.39□□□□□ -1.71
SPTLC3-205ENST00000476791 LINC01549A6NIU2 74 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 XCL1P47992 114 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 BLCAPP62952 87 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 SLC25A29Q8N8R3 303 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 XCL2Q9UBD3 114 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 IGHV1-69DA0A0B4J2H0 117 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 ZNF138P52744 262 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 HMGA2P52926 109 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 SLC25A2Q9BXI2 301 aa4.38□□□□□ -1.71
SPTLC3-205ENST00000476791 LCTP09848 1927 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 E7EUB6 86 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 PEX7O00628 323 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 COX7A2P2O60397 106 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 SPTBP11277 2137 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 C20orf197Q8N268 126 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 SPTSSAQ969W0 71 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 C8orf49Q96NF6 230 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 IL36RNQ9UBH0 155 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 MAST2Q6P0Q8 1798 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 TRBV5-4A0A0C4DH59 114 aa4.37□□□□□ -1.71
SPTLC3-205ENST00000476791 INAFM1C9JVW0 142 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms