RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 KHDC3LQ587J8 217 aa7.48□□□□□ -1.21
SEC13-214ENST00000476597 C6orf223Q8N319 242 aa7.48□□□□□ -1.21
SEC13-214ENST00000476597 VSIG2Q96IQ7 327 aa7.48□□□□□ -1.21
SEC13-214ENST00000476597 UPK3BQ9BT76 320 aa7.48□□□□□ -1.21
SEC13-214ENST00000476597 Q9H3A6 140 aa7.48□□□□□ -1.21
SEC13-214ENST00000476597 NACAE9PAV3 2078 aa7.48□□□□□ -1.21
SEC13-214ENST00000476597 DIRC3C9JPN6 131 aa7.47□□□□□ -1.21
SEC13-214ENST00000476597 EIF3GO75821 320 aaKnown RBP eCLIP7.47□□□□□ -1.21
SEC13-214ENST00000476597 ZNF266Q14584 549 aa7.47□□□□□ -1.21
SEC13-214ENST00000476597 Q8TAT8 98 aa7.47□□□□□ -1.21
SEC13-214ENST00000476597 ALG5Q9Y673 324 aa7.47□□□□□ -1.21
SEC13-214ENST00000476597 A0A096LPF7 62 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 PGPA6NDG6 321 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 TNP2Q05952 138 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 ACOT6Q3I5F7 207 aaPredicted RBP7.46□□□□□ -1.22
SEC13-214ENST00000476597 Q6AWC8 147 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 TMED6Q8WW62 240 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 ST6GAL2Q96JF0 529 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 ARPC5LQ9BPX5 153 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 OTORQ9NRC9 128 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 MRPS16Q9Y3D3 137 aaKnown RBP7.46□□□□□ -1.22
SEC13-214ENST00000476597 LENEPQ9Y5L5 61 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 PCLOQ9Y6V0 5065 aa7.46□□□□□ -1.22
SEC13-214ENST00000476597 APOBP04114 4563 aaKnown RBP7.45□□□□□ -1.22
SEC13-214ENST00000476597 HSPG2P98160 4391 aa7.45□□□□□ -1.22
SEC13-214ENST00000476597 ABCA13Q86UQ4 5058 aa7.45□□□□□ -1.22
SEC13-214ENST00000476597 A0A1W2PPV4 95 aa7.45□□□□□ -1.22
SEC13-214ENST00000476597 RAB2AP61019 212 aa7.45□□□□□ -1.22
SEC13-214ENST00000476597 PQLC2Q6ZP29 291 aa7.45□□□□□ -1.22
SEC13-214ENST00000476597 ARL6IP6Q8N6S5 226 aa7.45□□□□□ -1.22
SEC13-214ENST00000476597 HYLS1Q96M11 299 aa7.45□□□□□ -1.22
SEC13-214ENST00000476597 MDFICQ9P1T7 246 aa7.45□□□□□ -1.22
SEC13-214ENST00000476597 A0A1W2PPQ1 181 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 IGHV3-53P01767 116 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 SLAQ13239 276 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 FHL2Q14192 279 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 FAM74A1Q5RGS3 127 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 MUC21Q5SSG8 566 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 ZNF575Q86XF7 245 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 OR10G4Q8NGN3 311 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 OR10G9Q8NGN4 311 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 OR10G7Q8NGN6 311 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 KRTAP1-5Q9BYS1 174 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
SEC13-214ENST00000476597 PRO0255Q9UI72 69 aa7.44□□□□□ -1.22
SEC13-214ENST00000476597 PAX4O43316 350 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 PTTG1O95997 202 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 BTF3P20290 206 aaKnown RBP7.43□□□□□ -1.22
SEC13-214ENST00000476597 CRYBA4P53673 196 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 ZNF415Q09FC8 603 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 TDRG1Q3Y452 100 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 OR2G3Q8NGZ4 309 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 CMTM2Q8TAZ6 248 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 RASL10AQ92737 203 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 SPXQ9BT56 116 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 MED28Q9H204 178 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 HHLA3Q9XRX5 114 aa7.43□□□□□ -1.22
SEC13-214ENST00000476597 TRGV11A0A075B6L2 103 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 HMGB3O15347 200 aaKnown RBP7.42□□□□□ -1.22
SEC13-214ENST00000476597 STAG3L2P0CL84 134 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 STAG3L3P0CL85 134 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 TMEM183BQ1AE95 376 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 Q5BKY6 102 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 FAM159AQ6UWV7 190 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 GOLT1AQ6ZVE7 132 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 IQCF2Q8IXL9 164 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 TMEM183AQ8IXX5 376 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 HSD17B11Q8NBQ5 300 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 SUN5Q8TC36 379 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 TVP23CQ96ET8 276 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 AQP10Q96PS8 301 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 PSMG3Q9BT73 122 aaPredicted RBP7.42□□□□□ -1.22
SEC13-214ENST00000476597 ICOSQ9Y6W8 199 aa7.42□□□□□ -1.22
SEC13-214ENST00000476597 TRAV8-1A0A0A6YYK1 113 aa7.41□□□□□ -1.22
SEC13-214ENST00000476597 GNRH2O43555 120 aa7.41□□□□□ -1.22
SEC13-214ENST00000476597 ATP6V0CP27449 155 aa7.41□□□□□ -1.22
SEC13-214ENST00000476597 CDC34P49427 236 aaPredicted RBP7.41□□□□□ -1.22
SEC13-214ENST00000476597 SERF2P84101 59 aa7.41□□□□□ -1.22
SEC13-214ENST00000476597 ZNF479Q96JC4 524 aa7.41□□□□□ -1.22
SEC13-214ENST00000476597 C8orf49Q96NF6 230 aa7.41□□□□□ -1.22
SEC13-214ENST00000476597 RPH3ALQ9UNE2 315 aa7.41□□□□□ -1.22
SEC13-214ENST00000476597 MUC4Q99102 2169 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 TRAV21A0A0B4J279 112 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 SIVA1O15304 175 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 MBP02144 154 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 SFTA3P0C7M3 94 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 ARL14EPLP0DKL9 152 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 GNG5P63218 68 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 MRPL23Q16540 153 aaKnown RBP7.4□□□□□ -1.22
SEC13-214ENST00000476597 LYPD5Q6UWN5 251 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 ASB13Q8WXK3 278 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 RAB24Q969Q5 203 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 TREM1Q9NP99 234 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 TNFSF18Q9UNG2 199 aa7.4□□□□□ -1.22
SEC13-214ENST00000476597 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
SEC13-214ENST00000476597 IGHV3-16A0A0C4DH30 117 aa7.39□□□□□ -1.23
SEC13-214ENST00000476597 SERTM2A0A1B0GWG4 89 aa7.39□□□□□ -1.23
SEC13-214ENST00000476597 C16orf90A8MZG2 172 aa7.39□□□□□ -1.23
SEC13-214ENST00000476597 NXPH4O95158 308 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms