RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ARAP1Q96P48 1450 aa1.07□□□□□ -2.24
VPS50-212ENST00000476413 CSAG1Q6PB30 78 aa1.07□□□□□ -2.24
VPS50-212ENST00000476413 TRBV30A0A0K0K1B3 111 aa1.06□□□□□ -2.24
VPS50-212ENST00000476413 HBDP02042 147 aa1.06□□□□□ -2.24
VPS50-212ENST00000476413 HSPB11Q9Y547 144 aa1.06□□□□□ -2.24
VPS50-212ENST00000476413 MED23Q9ULK4 1368 aa1.06□□□□□ -2.24
VPS50-212ENST00000476413 J3KT08 172 aa1.05□□□□□ -2.24
VPS50-212ENST00000476413 SPTBP11277 2137 aa1.05□□□□□ -2.24
VPS50-212ENST00000476413 Q6ZQY7 126 aa1.05□□□□□ -2.24
VPS50-212ENST00000476413 TCTEX1D1Q8N7M0 179 aa1.05□□□□□ -2.24
VPS50-212ENST00000476413 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
VPS50-212ENST00000476413 WDR97A6NE52 1622 aa1.04□□□□□ -2.24
VPS50-212ENST00000476413 SLC25A5P05141 298 aaKnown RBP1.04□□□□□ -2.24
VPS50-212ENST00000476413 PRB4P10163 310 aaPredicted RBP1.04□□□□□ -2.24
VPS50-212ENST00000476413 DR1Q01658 176 aa1.04□□□□□ -2.24
VPS50-212ENST00000476413 CCSMST1Q4G0I0 132 aa1.04□□□□□ -2.24
VPS50-212ENST00000476413 C10orf111Q8N326 155 aa1.04□□□□□ -2.24
VPS50-212ENST00000476413 CCL19Q99731 98 aa1.04□□□□□ -2.24
VPS50-212ENST00000476413 OVOS2A0A0G2JMS6 1433 aa1.04□□□□□ -2.24
VPS50-212ENST00000476413 UNC13AQ9UPW8 1703 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 TRAV36DV7A0A075B6V5 113 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 A0A1W2PPB8 328 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 A0A1W2PRS3 328 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 NUPR2A6NF83 97 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 ARL5CA6NH57 179 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 KIR3DP1A8MWS1 328 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 UQCRQO14949 82 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 DNAJB13P59910 316 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 DSPPQ9NZW4 1301 aa1.03□□□□□ -2.24
VPS50-212ENST00000476413 A0A1B0GX51 115 aa1.02□□□□□ -2.25
VPS50-212ENST00000476413 TCRAP04437 139 aa1.02□□□□□ -2.25
VPS50-212ENST00000476413 SDC4P31431 198 aa1.02□□□□□ -2.25
VPS50-212ENST00000476413 QRFPP83859 136 aa1.02□□□□□ -2.25
VPS50-212ENST00000476413 OR8B8Q15620 311 aa1.02□□□□□ -2.25
VPS50-212ENST00000476413 ATOH7Q8N100 152 aa1.02□□□□□ -2.25
VPS50-212ENST00000476413 NINQ8N4C6 2090 aa1.01□□□□□ -2.25
VPS50-212ENST00000476413 A0A0D9SG42 100 aa1.01□□□□□ -2.25
VPS50-212ENST00000476413 IFITM5A6NNB3 132 aa1.01□□□□□ -2.25
VPS50-212ENST00000476413 BBIP1A8MTZ0 92 aa1.01□□□□□ -2.25
VPS50-212ENST00000476413 EDF1O60869 148 aaKnown RBP1.01□□□□□ -2.25
VPS50-212ENST00000476413 ETV6P41212 452 aa1.01□□□□□ -2.25
VPS50-212ENST00000476413 GTF2A1P52655 376 aaPredicted RBP1.01□□□□□ -2.25
VPS50-212ENST00000476413 Q86TA4 180 aa1.01□□□□□ -2.25
VPS50-212ENST00000476413 OTOSQ8NHW6 89 aa1.01□□□□□ -2.25
VPS50-212ENST00000476413 C19orf12Q9NSK7 152 aa1.01□□□□□ -2.25
VPS50-212ENST00000476413 ANKRD30AQ9BXX3 1397 aa1□□□□□ -2.25
VPS50-212ENST00000476413 CDC42EP2O14613 210 aa1□□□□□ -2.25
VPS50-212ENST00000476413 SULT1C4O75897 302 aa1□□□□□ -2.25
VPS50-212ENST00000476413 GYPBP06028 91 aa1□□□□□ -2.25
VPS50-212ENST00000476413 OR8I2Q8N0Y5 310 aa1□□□□□ -2.25
VPS50-212ENST00000476413 AP1S3Q96PC3 154 aa1□□□□□ -2.25
VPS50-212ENST00000476413 C10orf95Q9H7T3 257 aa1□□□□□ -2.25
VPS50-212ENST00000476413 COMMD3Q9UBI1 195 aa1□□□□□ -2.25
VPS50-212ENST00000476413 ZDBF2Q9HCK1 2354 aa1□□□□□ -2.25
VPS50-212ENST00000476413 DEGS1O15121 323 aa0.99□□□□□ -2.25
VPS50-212ENST00000476413 C3orf62Q6ZUJ4 267 aa0.99□□□□□ -2.25
VPS50-212ENST00000476413 AKAP14Q86UN6 197 aa0.99□□□□□ -2.25
VPS50-212ENST00000476413 PLAC4Q8WY50 150 aa0.99□□□□□ -2.25
VPS50-212ENST00000476413 ATG2AQ2TAZ0 1938 aa0.99□□□□□ -2.25
VPS50-212ENST00000476413 ZNF462Q96JM2 2506 aa0.98□□□□□ -2.25
VPS50-212ENST00000476413 ASH1LQ9NR48 2969 aaKnown RBP0.98□□□□□ -2.25
VPS50-212ENST00000476413 A0A1B0GW64 132 aa0.98□□□□□ -2.25
VPS50-212ENST00000476413 TMEM189A5PLL7 270 aa0.98□□□□□ -2.25
VPS50-212ENST00000476413 DPM2O94777 84 aa0.98□□□□□ -2.25
VPS50-212ENST00000476413 MT-ND4LP03901 98 aa0.98□□□□□ -2.25
VPS50-212ENST00000476413 LSM3P62310 102 aaKnown RBP0.98□□□□□ -2.25
VPS50-212ENST00000476413 SNRPD3P62318 126 aaKnown RBP0.98□□□□□ -2.25
VPS50-212ENST00000476413 ASB16-AS1Q495Z4 193 aa0.98□□□□□ -2.25
VPS50-212ENST00000476413 SPINK9Q5DT21 86 aa0.98□□□□□ -2.25
VPS50-212ENST00000476413 JPT1Q9UK76 154 aa0.98□□□□□ -2.25
VPS50-212ENST00000476413 KIDINS220Q9ULH0 1771 aa0.98□□□□□ -2.25
VPS50-212ENST00000476413 TNFSF15O95150 251 aa0.97□□□□□ -2.25
VPS50-212ENST00000476413 SCTP09683 121 aa0.97□□□□□ -2.25
VPS50-212ENST00000476413 CKS2P33552 79 aa0.97□□□□□ -2.25
VPS50-212ENST00000476413 XAF1Q6GPH4 301 aa0.97□□□□□ -2.25
VPS50-212ENST00000476413 DEFB132Q7Z7B7 95 aa0.97□□□□□ -2.25
VPS50-212ENST00000476413 SMIM7Q9BQ49 75 aa0.97□□□□□ -2.25
VPS50-212ENST00000476413 ARHGAP31Q2M1Z3 1444 aa0.97□□□□□ -2.25
VPS50-212ENST00000476413 NBDYA0A0U1RRE5 68 aa0.96□□□□□ -2.26
VPS50-212ENST00000476413 IGF2P01344 180 aa0.96□□□□□ -2.26
VPS50-212ENST00000476413 HSD17B12Q53GQ0 312 aa0.96□□□□□ -2.26
VPS50-212ENST00000476413 OR8J3Q8NGG0 315 aa0.96□□□□□ -2.26
VPS50-212ENST00000476413 MRPL36Q9P0J6 103 aaKnown RBP0.96□□□□□ -2.26
VPS50-212ENST00000476413 HELZP42694 1942 aaKnown RBP0.95□□□□□ -2.26
VPS50-212ENST00000476413 IGHV1-24A0A0C4DH33 117 aa0.95□□□□□ -2.26
VPS50-212ENST00000476413 C9JAW5 83 aa0.95□□□□□ -2.26
VPS50-212ENST00000476413 IGKCP01834 107 aa0.95□□□□□ -2.26
VPS50-212ENST00000476413 PSPHP78330 225 aa0.95□□□□□ -2.26
VPS50-212ENST00000476413 LYPD5Q6UWN5 251 aa0.95□□□□□ -2.26
VPS50-212ENST00000476413 MRPL35Q9NZE8 188 aaKnown RBP0.95□□□□□ -2.26
VPS50-212ENST00000476413 HIGD1AQ9Y241 93 aa0.95□□□□□ -2.26
VPS50-212ENST00000476413 TMEM30CPA0ZSE6 113 aa0.94□□□□□ -2.26
VPS50-212ENST00000476413 PAEPP09466 180 aa0.94□□□□□ -2.26
VPS50-212ENST00000476413 SPINT3P49223 89 aa0.94□□□□□ -2.26
VPS50-212ENST00000476413 CAV3P56539 151 aa0.94□□□□□ -2.26
VPS50-212ENST00000476413 PCBD1P61457 104 aa0.94□□□□□ -2.26
VPS50-212ENST00000476413 RHOHQ15669 191 aa0.94□□□□□ -2.26
VPS50-212ENST00000476413 TMEM244Q5VVB8 128 aa0.94□□□□□ -2.26
VPS50-212ENST00000476413 Q6ZS92 163 aa0.94□□□□□ -2.26
VPS50-212ENST00000476413 LINC00208Q96KT6 92 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms