RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
CCDC78-209ENST00000474647 PYGO2Q9BRQ0 406 aa9.61□□□□□ -0.87
CCDC78-209ENST00000474647 CT45A10P0DMU9 189 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 TPT1P13693 172 aaKnown RBP9.6□□□□□ -0.87
CCDC78-209ENST00000474647 MORN5Q5VZ52 161 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 Q6ZRG5 221 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 SLC51BQ86UW2 128 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 LYPD1Q8N2G4 141 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 OR1L4Q8NGR5 311 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 PFDN5Q99471 154 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 SH3BGRL3Q9H299 93 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 GSN-AS1Q9NRJ2 163 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 VPS13BQ7Z7G8 4022 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 FAT1Q14517 4588 aa9.6□□□□□ -0.87
CCDC78-209ENST00000474647 TRGV1A0A0A0MS02 117 aa9.59□□□□□ -0.87
CCDC78-209ENST00000474647 NXPH4O95158 308 aa9.59□□□□□ -0.87
CCDC78-209ENST00000474647 SERF2P84101 59 aa9.59□□□□□ -0.87
CCDC78-209ENST00000474647 DAZ2Q13117 558 aaKnown RBP9.59□□□□□ -0.87
CCDC78-209ENST00000474647 FFAR4Q5NUL3 377 aa9.59□□□□□ -0.87
CCDC78-209ENST00000474647 C10orf113Q5VZT2 155 aa9.59□□□□□ -0.87
CCDC78-209ENST00000474647 TMEM37Q8WXS4 190 aa9.59□□□□□ -0.87
CCDC78-209ENST00000474647 FRZBQ92765 325 aa9.59□□□□□ -0.87
CCDC78-209ENST00000474647 PGPEP1Q9NXJ5 209 aa9.59□□□□□ -0.87
CCDC78-209ENST00000474647 SRRM2Q9UQ35 2752 aaKnown RBP9.58□□□□□ -0.88
CCDC78-209ENST00000474647 NPIPB6E9PJ23 425 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 H3BQ15 152 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 SEC11BP0C7V7 166 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 DNAH10OSP0CZ25 163 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 IGLC2P0DOY2 106 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 NDUFA5Q16718 116 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 GCSAMLQ5JQS6 135 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 CDPF1Q6NVV7 123 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 ZNF680Q8NEM1 530 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 FAM210AQ96ND0 272 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 ODF3Q96PU9 254 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 FUT9Q9Y231 359 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 TNFRSF18Q9Y5U5 241 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 ICOSQ9Y6W8 199 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 MYCBP2O75592 4640 aa9.58□□□□□ -0.88
CCDC78-209ENST00000474647 C7orf71A4D174 169 aa9.57□□□□□ -0.88
CCDC78-209ENST00000474647 IGHV3-53P01767 116 aa9.57□□□□□ -0.88
CCDC78-209ENST00000474647 XGP55808 180 aa9.57□□□□□ -0.88
CCDC78-209ENST00000474647 ACOT6Q3I5F7 207 aaPredicted RBP9.57□□□□□ -0.88
CCDC78-209ENST00000474647 DNAJC4Q9NNZ3 241 aa9.57□□□□□ -0.88
CCDC78-209ENST00000474647 TRAV5A0A0B4J249 113 aa9.56□□□□□ -0.88
CCDC78-209ENST00000474647 PAX4O43316 350 aa9.56□□□□□ -0.88
CCDC78-209ENST00000474647 MBP02144 154 aa9.56□□□□□ -0.88
CCDC78-209ENST00000474647 SLC25A5P05141 298 aaKnown RBP9.56□□□□□ -0.88
CCDC78-209ENST00000474647 RAB2AP61019 212 aa9.56□□□□□ -0.88
CCDC78-209ENST00000474647 BTN1A1Q13410 526 aa9.56□□□□□ -0.88
CCDC78-209ENST00000474647 C11orf72Q8NBR9 251 aa9.56□□□□□ -0.88
CCDC78-209ENST00000474647 SAT2Q96F10 170 aaPredicted RBP9.56□□□□□ -0.88
CCDC78-209ENST00000474647 MRPL32Q9BYC8 188 aaKnown RBP9.56□□□□□ -0.88
CCDC78-209ENST00000474647 FLG2Q5D862 2391 aaPredicted RBP9.56□□□□□ -0.88
CCDC78-209ENST00000474647 ERCC8Q13216 396 aa9.55□□□□□ -0.88
CCDC78-209ENST00000474647 GUK1Q16774 197 aa9.55□□□□□ -0.88
CCDC78-209ENST00000474647 EIF5AL1Q6IS14 154 aaKnown RBP9.55□□□□□ -0.88
CCDC78-209ENST00000474647 EIF4E3Q8N5X7 224 aaKnown RBP9.55□□□□□ -0.88
CCDC78-209ENST00000474647 OR10G4Q8NGN3 311 aa9.55□□□□□ -0.88
CCDC78-209ENST00000474647 OR10G9Q8NGN4 311 aa9.55□□□□□ -0.88
CCDC78-209ENST00000474647 OR10G7Q8NGN6 311 aa9.55□□□□□ -0.88
CCDC78-209ENST00000474647 TMED6Q8WW62 240 aa9.55□□□□□ -0.88
CCDC78-209ENST00000474647 PHYHIPLQ96FC7 376 aa9.55□□□□□ -0.88
CCDC78-209ENST00000474647 KLF12Q9Y4X4 402 aa9.55□□□□□ -0.88
CCDC78-209ENST00000474647 M0R3E3 92 aa9.54□□□□□ -0.88
CCDC78-209ENST00000474647 SMR3BP02814 79 aaPredicted RBP9.54□□□□□ -0.88
CCDC78-209ENST00000474647 TCL1AP56279 114 aa9.54□□□□□ -0.88
CCDC78-209ENST00000474647 KRTAP10-1P60331 282 aa9.54□□□□□ -0.88
CCDC78-209ENST00000474647 AKR1C8PQ5T2L2 129 aa9.54□□□□□ -0.88
CCDC78-209ENST00000474647 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
CCDC78-209ENST00000474647 C18orf15Q96N68 181 aa9.54□□□□□ -0.88
CCDC78-209ENST00000474647 MRPL16Q9NX20 251 aaKnown RBP9.54□□□□□ -0.88
CCDC78-209ENST00000474647 A0A087WTM6 91 aa9.53□□□□□ -0.88
CCDC78-209ENST00000474647 UMAD1C9J7I0 102 aa9.53□□□□□ -0.88
CCDC78-209ENST00000474647 ZNF324O75467 553 aaPredicted RBP9.53□□□□□ -0.88
CCDC78-209ENST00000474647 RNASE4P34096 147 aaKnown RBP9.53□□□□□ -0.88
CCDC78-209ENST00000474647 CDC34P49427 236 aaPredicted RBP9.53□□□□□ -0.88
CCDC78-209ENST00000474647 ICAM4Q14773 271 aa9.53□□□□□ -0.88
CCDC78-209ENST00000474647 FAM122CQ6P4D5 195 aa9.53□□□□□ -0.88
CCDC78-209ENST00000474647 MIR17HGQ75NE6 70 aa9.53□□□□□ -0.88
CCDC78-209ENST00000474647 C8orf49Q96NF6 230 aa9.53□□□□□ -0.88
CCDC78-209ENST00000474647 LY96Q9Y6Y9 160 aa9.53□□□□□ -0.88
CCDC78-209ENST00000474647 TRAV9-2A0A087WT02 112 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 A0A1W2PPV4 95 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 KLLNB2CW77 178 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 SPINK4O60575 86 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 GPX1P07203 203 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 HAMPP81172 84 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 ANXA2RQ3ZCQ2 193 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 LYPD5Q6UWN5 251 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 DPPA3Q6W0C5 159 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 LINC00467Q9BRT7 94 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 SLC25A2Q9BXI2 301 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 MDFICQ9P1T7 246 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 PRO0255Q9UI72 69 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 TP53TG3Q9ULZ0 132 aa9.52□□□□□ -0.89
CCDC78-209ENST00000474647 CTXND1A0A1B0GTU2 59 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 S100A1P23297 94 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 SULT1A2P50226 295 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 CRYBA4P53673 196 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms