RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 LSM4Q9Y4Z0 139 aaKnown RBP3.6□□□□□ -1.83
CCNL1-215ENST00000474539 HLA-DRB4X5D2U9 266 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 SVILO95425 2214 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 TRBV24-1A0A075B6N3 115 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 TRAV13-2A0A0B4J235 113 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 LOC107984156A0A0G2JMH3 177 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 F8WDY8 70 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 ANGP03950 147 aaKnown RBP3.6□□□□□ -1.83
CCNL1-215ENST00000474539 PMVKQ15126 192 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 CD300EQ496F6 205 aaPredicted RBP3.6□□□□□ -1.83
CCNL1-215ENST00000474539 PRIMA1Q86XR5 153 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 ARL17AQ8IVW1 177 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 C11orf52Q96A22 123 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 FAM110AQ9BQ89 295 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 CHCHD7Q9BUK0 85 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 LINC00474Q9P2X8 69 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 RP1P56715 2156 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 IGKV1D-8A0A087WSZ0 117 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 WI2-2373I1.2A0A1W2PRP0 233 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 I3L2K1 104 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 K7ERU9 68 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 NXPH4O95158 308 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 IGHV3-53P01767 116 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 WT1-ASQ06250 92 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 SPATA45Q537H7 98 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 PIK3CD-AS1Q5SR53 167 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 C9orf47Q6ZRZ4 202 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 Q6ZVH6 145 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 EXOC3-AS1Q8N2X6 119 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 ZNRF2Q8NHG8 242 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 NDUFA1O15239 70 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 NDUFS7O75251 213 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 SLURP1P55000 103 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 Q8N7P7 452 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 STPG4Q8N801 248 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 AURKAIP1Q9NWT8 199 aaPredicted RBP3.59□□□□□ -1.83
CCNL1-215ENST00000474539 NDUFA12Q9UI09 145 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 U3KQE9 123 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 INTS1Q8N201 2190 aaKnown RBP3.59□□□□□ -1.83
CCNL1-215ENST00000474539 ZNF503-AS2A6NEH8 195 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 KNCNA6PVL3 124 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 GYPEP15421 78 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 TIRAPP58753 221 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 Q6ZSV7 163 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 C1orf147Q96MC9 270 aaPredicted RBP3.59□□□□□ -1.83
CCNL1-215ENST00000474539 NUP214P35658 2090 aaPredicted RBP3.59□□□□□ -1.83
CCNL1-215ENST00000474539 IGKV1-6A0A0C4DH72 117 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 TFF1P04155 84 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 SSBP2P81877 361 aaPredicted RBP3.59□□□□□ -1.83
CCNL1-215ENST00000474539 MRGPRG-AS1Q2M3A8 158 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 RSPO1Q2MKA7 263 aaPredicted RBP3.59□□□□□ -1.83
CCNL1-215ENST00000474539 ANXA2RQ3ZCQ2 193 aa3.59□□□□□ -1.83
CCNL1-215ENST00000474539 A8MWP6 167 aa3.59□□□□□ -1.84
CCNL1-215ENST00000474539 C19orf84I3L1E1 186 aa3.59□□□□□ -1.84
CCNL1-215ENST00000474539 C14orf178Q8N769 122 aaPredicted RBP3.59□□□□□ -1.84
CCNL1-215ENST00000474539 OCC1Q8TAD7 63 aa3.59□□□□□ -1.84
CCNL1-215ENST00000474539 HEATR5BQ9P2D3 2071 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 PRSS47A8MTI9 375 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 ZFP36P26651 326 aaKnown RBP3.58□□□□□ -1.84
CCNL1-215ENST00000474539 FXYD7P58549 80 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 RPL32P62910 135 aaKnown RBP3.58□□□□□ -1.84
CCNL1-215ENST00000474539 C5orf30Q96GV9 206 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 NOP10Q9NPE3 64 aaKnown RBP3.58□□□□□ -1.84
CCNL1-215ENST00000474539 ERG28Q9UKR5 140 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 ZNF706Q9Y5V0 76 aaPredicted RBP3.58□□□□□ -1.84
CCNL1-215ENST00000474539 PCNX2A6NKB5 2137 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 COX7A2LO14548 114 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 BUB3O43684 328 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 PRR20EP86478 221 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 PRR20CP86479 221 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 PRR20DP86480 221 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 PRR20BP86481 221 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 PRR20AP86496 221 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 HSD52Q0P140 79 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 FAM104BQ5XKR9 115 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 ADAMTSL5Q6ZMM2 481 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 SNHG12Q9BXW3 62 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 TP53TG1Q9Y2A0 90 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 TRAV8-4A0A0B4J246 113 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 SDHAF1A6NFY7 115 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 GAGE10A6NGK3 116 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 IFITM1P13164 125 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 HHLA3Q9XRX5 114 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 NPSP0C0P6 89 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 CRIP2P52943 208 aaPredicted RBP3.58□□□□□ -1.84
CCNL1-215ENST00000474539 CRYBA4P53673 196 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 LINC00322Q6ZN03 302 aaPredicted RBP3.58□□□□□ -1.84
CCNL1-215ENST00000474539 ZC2HC1AQ96GY0 325 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 VPS25Q9BRG1 176 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 SMIM2Q9BVW6 85 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 OBSL1O75147 1896 aa3.58□□□□□ -1.84
CCNL1-215ENST00000474539 K7EIM0 57 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 SNRPCP09234 159 aaKnown RBP3.57□□□□□ -1.84
CCNL1-215ENST00000474539 PRB3Q04118 309 aaPredicted RBP3.57□□□□□ -1.84
CCNL1-215ENST00000474539 MRPL52Q86TS9 123 aaKnown RBP3.57□□□□□ -1.84
CCNL1-215ENST00000474539 SLC25A29Q8N8R3 303 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 C8orf49Q96NF6 230 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 B9D2Q9BPU9 175 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 SCN2AQ99250 2005 aa3.57□□□□□ -1.84
CCNL1-215ENST00000474539 DENND4CQ5VZ89 1909 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms