RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 hDV102S1A0JD36 115 aa16.02■□□□□ 0.16
SMIM11A-204ENST00000474455 K7EQM0 130 aa16.02■□□□□ 0.16
SMIM11A-204ENST00000474455 IGLC1P0CG04 106 aa16.02■□□□□ 0.16
SMIM11A-204ENST00000474455 HIST1H1AQ02539 215 aaPredicted RBP16.02■□□□□ 0.16
SMIM11A-204ENST00000474455 VAMP3Q15836 100 aa16.02■□□□□ 0.16
SMIM11A-204ENST00000474455 C2CD3Q4AC94 2353 aa16.02■□□□□ 0.15
SMIM11A-204ENST00000474455 I3L2K1 104 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 K7EIM0 57 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 TAX1BP3O14907 124 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 DPF1Q92782 380 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 NUDT3O95989 172 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 IGHV3-23P01764 117 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 PSG1P11464 419 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 LYZP61626 148 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 CFHR3Q02985 330 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 Q6ZVH6 145 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 PRNTQ86SH4 94 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 KLK15Q9H2R5 256 aa16.01■□□□□ 0.15
SMIM11A-204ENST00000474455 GOLT1AQ6ZVE7 132 aa16■□□□□ 0.15
SMIM11A-204ENST00000474455 Q8N2B8 174 aa16■□□□□ 0.15
SMIM11A-204ENST00000474455 CSN1S1P47710 185 aa15.99■□□□□ 0.15
SMIM11A-204ENST00000474455 SAPCD1Q5SSQ6 148 aa15.99■□□□□ 0.15
SMIM11A-204ENST00000474455 HIST2H2BDQ6DRA6 164 aa15.99■□□□□ 0.15
SMIM11A-204ENST00000474455 SHANK2-AS3Q9BTD1 123 aa15.99■□□□□ 0.15
SMIM11A-204ENST00000474455 AP5S1Q9NUS5 200 aa15.99■□□□□ 0.15
SMIM11A-204ENST00000474455 TRBV19A0A075B6N1 114 aa15.98■□□□□ 0.15
SMIM11A-204ENST00000474455 H3BTX0 84 aa15.98■□□□□ 0.15
SMIM11A-204ENST00000474455 S100A7AQ86SG5 101 aa15.98■□□□□ 0.15
SMIM11A-204ENST00000474455 BPIFA4PQ86YQ2 179 aa15.98■□□□□ 0.15
SMIM11A-204ENST00000474455 COX8AP10176 69 aa15.97■□□□□ 0.15
SMIM11A-204ENST00000474455 OR10AG1Q8NH19 301 aa15.97■□□□□ 0.15
SMIM11A-204ENST00000474455 H3BRN7 92 aa15.97■□□□□ 0.15
SMIM11A-204ENST00000474455 C15orf32Q32M92 178 aa15.97■□□□□ 0.15
SMIM11A-204ENST00000474455 ZNF493Q6ZR52 646 aa15.97■□□□□ 0.15
SMIM11A-204ENST00000474455 FA2HQ7L5A8 372 aa15.97■□□□□ 0.15
SMIM11A-204ENST00000474455 EXOC3-AS1Q8N2X6 119 aa15.97■□□□□ 0.15
SMIM11A-204ENST00000474455 ZC2HC1AQ96GY0 325 aa15.97■□□□□ 0.15
SMIM11A-204ENST00000474455 TRAV8-1A0A0A6YYK1 113 aa15.96■□□□□ 0.15
SMIM11A-204ENST00000474455 IGLV1-40P01703 118 aa15.96■□□□□ 0.15
SMIM11A-204ENST00000474455 PF4V1P10720 104 aa15.96■□□□□ 0.15
SMIM11A-204ENST00000474455 ZNF747Q9BV97 191 aa15.96■□□□□ 0.15
SMIM11A-204ENST00000474455 PSG8Q9UQ74 426 aa15.96■□□□□ 0.15
SMIM11A-204ENST00000474455 F8W735 103 aaPredicted RBP15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 TRGV3P03979 118 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 GPR183P32249 361 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 PSG3Q16557 428 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 KLK9Q2XQG4 91 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 ANKRD39Q53RE8 183 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 KLK9Q9UKQ9 250 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 SERTM2A0A1B0GWG4 89 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 ZNF785A8K8V0 405 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 ARMS2P0C7Q2 107 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 JMJD8Q96S16 334 aa15.95■□□□□ 0.14
SMIM11A-204ENST00000474455 MUC21A0A0G2JKD1 596 aa15.94■□□□□ 0.14
SMIM11A-204ENST00000474455 MUC21A0A140T8X8 626 aa15.94■□□□□ 0.14
SMIM11A-204ENST00000474455 MUC21Q5SSG8 566 aa15.94■□□□□ 0.14
SMIM11A-204ENST00000474455 SIGLEC15Q6ZMC9 328 aa15.94■□□□□ 0.14
SMIM11A-204ENST00000474455 OR1N2Q8NGR9 330 aa15.94■□□□□ 0.14
SMIM11A-204ENST00000474455 PRSS3P2Q8NHM4 247 aa15.94■□□□□ 0.14
SMIM11A-204ENST00000474455 ZNF580Q9UK33 172 aa15.94■□□□□ 0.14
SMIM11A-204ENST00000474455 IGKV1-17P01599 117 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 IGHG4P01861 327 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 PPBPP02775 128 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 RAB9AP51151 201 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 ZNF138P52744 262 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 SEC11AP67812 179 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 PRR31Q5SQ13 230 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 THYN1Q9P016 225 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 U3KQK5 164 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 PSMB8P28062 276 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 C21orf62-AS1Q17RA5 79 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 LINC01006Q8NI28 216 aa15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 PEF1Q9UBV8 284 aaKnown RBP15.93■□□□□ 0.14
SMIM11A-204ENST00000474455 IGHV3-11P01762 117 aa15.92■□□□□ 0.14
SMIM11A-204ENST00000474455 PDE6HQ13956 83 aa15.92■□□□□ 0.14
SMIM11A-204ENST00000474455 ARL6IP6Q8N6S5 226 aa15.92■□□□□ 0.14
SMIM11A-204ENST00000474455 C21orf62Q9NYP8 219 aa15.92■□□□□ 0.14
SMIM11A-204ENST00000474455 OR2T8A6NH00 312 aa15.91■□□□□ 0.14
SMIM11A-204ENST00000474455 FBLL1A6NHQ2 334 aaKnown RBP15.91■□□□□ 0.14
SMIM11A-204ENST00000474455 CSN3P07498 182 aa15.91■□□□□ 0.14
SMIM11A-204ENST00000474455 CCDC140Q96MF4 163 aa15.91■□□□□ 0.14
SMIM11A-204ENST00000474455 CT45A10P0DMU9 189 aa15.91■□□□□ 0.14
SMIM11A-204ENST00000474455 MRPS12O15235 138 aaKnown RBP15.9■□□□□ 0.14
SMIM11A-204ENST00000474455 ATP5G2Q06055 141 aa15.9■□□□□ 0.14
SMIM11A-204ENST00000474455 LGALS9BQ3B8N2 356 aa15.9■□□□□ 0.14
SMIM11A-204ENST00000474455 LGALS9CQ6DKI2 356 aa15.9■□□□□ 0.14
SMIM11A-204ENST00000474455 ZNF502Q8TBZ5 544 aa15.9■□□□□ 0.14
SMIM11A-204ENST00000474455 ZNF414Q96IQ9 312 aa15.9■□□□□ 0.14
SMIM11A-204ENST00000474455 WI2-2373I1.2A0A1W2PRP0 233 aa15.89■□□□□ 0.13
SMIM11A-204ENST00000474455 MFAP4P55083 255 aa15.89■□□□□ 0.13
SMIM11A-204ENST00000474455 C2orf91Q6ZV80 131 aa15.89■□□□□ 0.13
SMIM11A-204ENST00000474455 COX8CQ7Z4L0 72 aa15.89■□□□□ 0.13
SMIM11A-204ENST00000474455 C16orf95Q9H693 158 aa15.89■□□□□ 0.13
SMIM11A-204ENST00000474455 TP73-AS1Q9UF72 201 aa15.89■□□□□ 0.13
SMIM11A-204ENST00000474455 H3BUA1 57 aa15.88■□□□□ 0.13
SMIM11A-204ENST00000474455 TRBV12-3P01733 135 aa15.88■□□□□ 0.13
SMIM11A-204ENST00000474455 CLEC3BP05452 202 aa15.88■□□□□ 0.13
SMIM11A-204ENST00000474455 TCTEX1D4Q5JR98 221 aa15.88■□□□□ 0.13
SMIM11A-204ENST00000474455 CLEC19AQ6UXS0 136 aa15.88■□□□□ 0.13
SMIM11A-204ENST00000474455 ZNF491Q8N8L2 437 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms