RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 GDF5OSQ5U4N7 250 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 BORCS7Q96B45 105 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 ZC2HC1AQ96GY0 325 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 MDFIQ99750 246 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 C1QTNF4Q9BXJ3 329 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 OSTCQ9NRP0 149 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 NAGKQ9UJ70 344 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 TMEM189A5PLL7 270 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 H3BMM0 161 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 K7EN84 100 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 INSP01308 110 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 ORM1P02763 201 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 PFN1P07737 140 aaKnown RBP7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 SPINK13Q1W4C9 94 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 MORN3Q6PF18 240 aaPredicted RBP7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 FAM231DQ6ZW35 169 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 OR2D3Q8NGH3 330 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 BTF3L4Q96K17 158 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 TMEM208Q9BTX3 173 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 MLST8Q9BVC4 326 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 RNASE7Q9H1E1 156 aaKnown RBP7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 RPP21Q9H633 154 aaKnown RBP7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 SRD5A3Q9H8P0 318 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 SMCO4Q9NRQ5 59 aa7.63□□□□□ -1.19
PRPF38A-202ENST00000474048 C7orf71A4D174 169 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 A8MWL6 223 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 M0R2Z0 102 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 WIPF1O43516 503 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 SH2D1AO60880 128 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 IGLV2-8P01709 118 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 CRISP2P16562 243 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 ZNF124Q15973 351 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 OXLD1Q5BKU9 147 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 FAM159AQ6UWV7 190 aa7.62□□□□□ -1.19
PRPF38A-202ENST00000474048 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 CXorf65A6NEN9 183 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 RPL35AP18077 110 aaKnown RBP7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 S100A4P26447 101 aaKnown RBP7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 APOC4P55056 127 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 FXYD7P58549 80 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 BTN1A1Q13410 526 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 DEFB125Q8N687 156 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 NUDT10Q8NFP7 164 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 SPATA3Q8NHX4 192 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 NUDT11Q96G61 164 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 KCNS1Q96KK3 526 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 CLUHP3Q96NS8 147 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 TMEM242Q9NWH2 141 aa7.61□□□□□ -1.19
PRPF38A-202ENST00000474048 TRAV12-2A0A075B6T6 113 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 TMSB15BA0A087X1C1 80 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 LOC102724200A0A096LPH7 203 aaPredicted RBP7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 CT83Q5H943 113 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 Q6AWC8 147 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 COX8CQ7Z4L0 72 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 TRPT1Q86TN4 253 aaKnown RBP7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 C20orf144Q9BQM9 153 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 TPPP3Q9BW30 176 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 WFDC10AQ9H1F0 79 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 IL36BQ9NZH7 164 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 GOLT1BQ9Y3E0 138 aa7.6□□□□□ -1.19
PRPF38A-202ENST00000474048 C19orf71A6NCJ1 209 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 KLLNB2CW77 178 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 CA1P00915 261 aaPredicted RBP7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 ASIPP42127 132 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 GFI1BQ5VTD9 330 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 TMEM88Q6PEY1 159 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 TMEM256Q8N2U0 113 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 ZFAND2AQ8N6M9 145 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 TSKUQ8WUA8 353 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 FAM19A4Q96LR4 140 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 IMMP2LQ96T52 175 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 XCL2Q9UBD3 114 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 NAT8BQ9UHF3 227 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 URGCP-MRPS24S4R325 110 aa7.59□□□□□ -1.19
PRPF38A-202ENST00000474048 TRGV11A0A075B6L2 103 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 IGHV3OR16-12A0A075B7B8 117 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 A0A1W2PPQ1 181 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 CBY3A6NI87 242 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 A8MTW9 85 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 G3V4G9 280 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 HTN1P15515 57 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 TCL1AP56279 114 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 KRTAP21-3Q3LHN1 58 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 MUC21Q5SSG8 566 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 ATRAIDQ6UW56 229 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 CBLN2Q8IUK8 224 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 LINC01587Q99440 93 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 GFRA4Q9GZZ7 299 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 V9GYV3 84 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 SORL1Q92673 2214 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 TENM1Q9UKZ4 2725 aa7.58□□□□□ -1.2
PRPF38A-202ENST00000474048 FBN1P35555 2871 aaKnown RBP7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 TRAV9-1A0A075B6T8 112 aa7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 IGHV1OR15-1A0A075B7D0 117 aa7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 FAM231BA6NCW3 169 aa7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 SCO1O75880 301 aa7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 ZNF80P51504 273 aaPredicted RBP7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 EGFEM1PQ0D2K5 195 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms