RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 SDK1Q7Z5N4 2213 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 IGHV4-4A0A075B6R2 117 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 IGHV1-3A0A0C4DH29 117 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 MBD3L4A6NDZ8 208 aaPredicted RBP3.61□□□□□ -1.83
U2SURP-208ENST00000473835 MBD3L3A6NE82 208 aaPredicted RBP3.61□□□□□ -1.83
U2SURP-208ENST00000473835 MBD3L5A6NJ08 208 aaPredicted RBP3.61□□□□□ -1.83
U2SURP-208ENST00000473835 NDUFA3O95167 84 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 MBD3L2Q8NHZ7 208 aaPredicted RBP3.61□□□□□ -1.83
U2SURP-208ENST00000473835 CACNA1GO43497 2377 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 LINC01549A6NIU2 74 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 CRLF1O75462 422 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 CRYGDP07320 174 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 PRB3Q04118 309 aaPredicted RBP3.61□□□□□ -1.83
U2SURP-208ENST00000473835 GFRALQ6UXV0 394 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 NDUFA11Q86Y39 141 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 DYNAPQ8N1N2 210 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 LINC01600Q96MT4 127 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 CCL8P80075 99 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 LAGE3Q14657 143 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 PPDPFLQ8WWR9 84 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 FANCD2OSQ96PS1 177 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 FAM110AQ9BQ89 295 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 MED13Q9UHV7 2174 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 BDP1A6H8Y1 2624 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 DCHS2Q6V1P9 2916 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 F8VRH5 84 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 ANKRD29Q8N6D5 301 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 TOMM6Q96B49 74 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 FBXL15Q9H469 300 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 FAM215AQ9Y5M1 114 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 IGLV4-69A0A075B6H9 119 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 RHODO00212 210 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 TSHBP01222 138 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 ERCC8Q13216 396 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 S4R3C0 116 aa3.61□□□□□ -1.83
U2SURP-208ENST00000473835 DMXL1Q9Y485 3027 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 TMEM178BH3BS89 294 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 NBL1P41271 181 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 CRIP2P52943 208 aaPredicted RBP3.6□□□□□ -1.83
U2SURP-208ENST00000473835 TSPEAR-AS2P59090 65 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 GAGE5Q13069 117 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 GAGE6Q13070 117 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 TMEM78Q5T7P6 136 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 NUP37Q8NFH4 326 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 RPEQ96AT9 228 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 TACC2O95359 2948 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 CCDC179H3BU77 68 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 M0QXV9 152 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 TTC28Q96AY4 2481 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 IGLV11-55A0A075B6I3 123 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 NCBP2LA6PVI3 153 aaKnown RBP3.6□□□□□ -1.83
U2SURP-208ENST00000473835 H7C1H1 209 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 IGHV3-30P01768 117 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 ELANEP08246 267 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 CFC1BP0CG36 223 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 CFC1P0CG37 223 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 IGHV3-30-5P0DP03 117 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 Q6ZS46 218 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 TRAV4A0A0B4J268 109 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 BUB1B-PAK6H3BSN5 160 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 ZNF688P0C7X2 276 aa3.6□□□□□ -1.83
U2SURP-208ENST00000473835 CENPVL3A0A0U1RRI6 287 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 ENSAO43768 121 aaKnown RBP3.59□□□□□ -1.83
U2SURP-208ENST00000473835 PSMB2P49721 201 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 SFTA2Q6UW10 78 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 OR11H6Q8NGC7 330 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 BAALCQ8WXS3 180 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 SRSF8Q9BRL6 282 aaKnown RBP3.59□□□□□ -1.83
U2SURP-208ENST00000473835 PRADC1Q9BSG0 188 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 KAAG1Q9UBP8 84 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 UFC1Q9Y3C8 167 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 A0A0J9YY99 117 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 B5MCH6 92 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 ADIPOQQ15848 244 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 IGFL3Q6UXB1 125 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 IGFBPL1Q8WX77 278 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 VCX2Q9H322 139 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 ODF3Q96PU9 254 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 SVILO95425 2214 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 TRBV7-9A0A0J9YWB2 115 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 AAMDCQ9H7C9 122 aa3.59□□□□□ -1.83
U2SURP-208ENST00000473835 TRAV8-2A0A0B4J237 113 aa3.59□□□□□ -1.84
U2SURP-208ENST00000473835 C17orf100A8MU93 164 aa3.59□□□□□ -1.84
U2SURP-208ENST00000473835 KLHL30-AS1Q8NEE0 82 aa3.59□□□□□ -1.84
U2SURP-208ENST00000473835 CTSGP08311 255 aa3.59□□□□□ -1.84
U2SURP-208ENST00000473835 NDUFV3P56181 108 aaKnown RBP3.59□□□□□ -1.84
U2SURP-208ENST00000473835 PRR9Q5T870 116 aa3.59□□□□□ -1.84
U2SURP-208ENST00000473835 PLXNB1O43157 2135 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 FABP5P3A8MUU1 101 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 SLC25A16P16260 332 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 NDPQ00604 133 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 FDCSPQ8NFU4 85 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 SMIM2Q9BVW6 85 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 ORM1P02763 201 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 TMEM95Q3KNT9 176 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 RNF182Q8N6D2 247 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 CACNA1HO95180 2353 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 CLPSL1A2RUU4 121 aa3.58□□□□□ -1.84
U2SURP-208ENST00000473835 RBAKDNA6NC62 111 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms