RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
CDHR3-209ENST00000472116 VCX3AQ9NNX9 186 aa6.49□□□□□ -1.37
CDHR3-209ENST00000472116 KLK12Q9UKR0 248 aa6.49□□□□□ -1.37
CDHR3-209ENST00000472116 A0A087WWC5 75 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 A0A0B4J2A0 478 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 TRBV6-4A0A1B0GX49 114 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 M0R2P5 195 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 HIST1H1EP10412 219 aaKnown RBP6.48□□□□□ -1.37
CDHR3-209ENST00000472116 BAK1Q16611 211 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 TMEM183BQ1AE95 376 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 SPINK6Q6UWN8 80 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 FAM159AQ6UWV7 190 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 Q6ZQT7 251 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 TMEM183AQ8IXX5 376 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 FAM19A4Q96LR4 140 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 MRPS26Q9BYN8 205 aaKnown RBP6.48□□□□□ -1.37
CDHR3-209ENST00000472116 SLC39A9Q9NUM3 307 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 SHPKQ9UHJ6 478 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 VAX2Q9UIW0 290 aa6.48□□□□□ -1.37
CDHR3-209ENST00000472116 A0A087WYN8 130 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 PIGBOS1A0A0B4J2F0 54 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 PGPA6NDG6 321 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 C5orf51A6NDU8 294 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 USP17L23D6RBM5 183 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 COX7A2P2O60397 106 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 CIDEAO60543 219 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 CD3DP04234 171 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 SPANXN5Q5MJ07 72 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 GTSF1Q8WW33 167 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 SAT2Q96F10 170 aaPredicted RBP6.47□□□□□ -1.37
CDHR3-209ENST00000472116 AGPAT4-IT1Q9H0P7 198 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 PRELID1Q9Y255 219 aa6.47□□□□□ -1.37
CDHR3-209ENST00000472116 A0A087WX48 190 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 TRAV26-2A0A0B4J265 109 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 FAM231BA6NCW3 169 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 PRSS46E5RG02 174 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 GOSR2O14653 212 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 HLA-DQA1P01909 254 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 CRPP02741 224 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 IGLC2P0DOY2 106 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 UBE2MP61081 183 aaKnown RBP6.46□□□□□ -1.38
CDHR3-209ENST00000472116 PRR3P79522 188 aaKnown RBP6.46□□□□□ -1.38
CDHR3-209ENST00000472116 SURF2Q15527 256 aaPredicted RBP6.46□□□□□ -1.38
CDHR3-209ENST00000472116 PATE2Q6UY27 113 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 NIT1Q86X76 327 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 ZFAND2AQ8N6M9 145 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 ATP5SQ99766 215 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 RTBDNQ9BSG5 229 aaPredicted RBP6.46□□□□□ -1.38
CDHR3-209ENST00000472116 BATF3Q9NR55 127 aa6.46□□□□□ -1.38
CDHR3-209ENST00000472116 STRAPQ9Y3F4 350 aaKnown RBP6.46□□□□□ -1.38
CDHR3-209ENST00000472116 H3BQ15 152 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 M0R3E3 92 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 WRBO00258 174 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 ZNF253O75346 499 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 RAB3DO95716 219 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 ANXA3P12429 323 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 SRPXP78539 464 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 CIRBPQ14011 172 aaKnown RBP6.45□□□□□ -1.38
CDHR3-209ENST00000472116 PRR9Q5T870 116 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 ATRAIDQ6UW56 229 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 LYZL2Q7Z4W2 148 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 ZNF546Q86UE3 836 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 DNAJC30Q96LL9 226 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 AAMDCQ9H7C9 122 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 PRR13Q9NZ81 148 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 NAGKQ9UJ70 344 aa6.45□□□□□ -1.38
CDHR3-209ENST00000472116 H7C1H1 209 aa6.44□□□□□ -1.38
CDHR3-209ENST00000472116 PRSS1P07477 247 aa6.44□□□□□ -1.38
CDHR3-209ENST00000472116 SMIM18P0DKX4 95 aa6.44□□□□□ -1.38
CDHR3-209ENST00000472116 TAS2R19P59542 299 aa6.44□□□□□ -1.38
CDHR3-209ENST00000472116 PRR4Q16378 134 aa6.44□□□□□ -1.38
CDHR3-209ENST00000472116 C10orf113Q5VZT2 155 aa6.44□□□□□ -1.38
CDHR3-209ENST00000472116 ZNF492Q9P255 531 aa6.44□□□□□ -1.38
CDHR3-209ENST00000472116 TIMM9Q9Y5J7 89 aa6.44□□□□□ -1.38
CDHR3-209ENST00000472116 IGHV3-64A0A075B6Q5 118 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 IGHV3-73A0A0B4J1V6 119 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 H3BP45 60 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 AGPAT2O15120 278 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 SYNGR2O43760 224 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 APOA1P02647 267 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 MGST1P10620 155 aaKnown RBP6.43□□□□□ -1.38
CDHR3-209ENST00000472116 SLC38A11Q08AI6 406 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 CYB561D1Q8N8Q1 229 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 CHCHD7Q9BUK0 85 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 KRTAP4-2Q9BYR5 136 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 NPVFQ9HCQ7 196 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 NDUFA13Q9P0J0 144 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 MGAT4CQ9UBM8 478 aa6.43□□□□□ -1.38
CDHR3-209ENST00000472116 IGKV2-40A0A087WW87 121 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-209ENST00000472116 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-209ENST00000472116 GAGE12JA6NER3 117 aa6.42□□□□□ -1.38
CDHR3-209ENST00000472116 DISC1C4P0D8 188 aa6.42□□□□□ -1.38
CDHR3-209ENST00000472116 IGKV2D-40P01614 121 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-209ENST00000472116 ZNF138P52744 262 aa6.42□□□□□ -1.38
CDHR3-209ENST00000472116 GAGE1Q13065 139 aa6.42□□□□□ -1.38
CDHR3-209ENST00000472116 GAGE4Q13068 117 aa6.42□□□□□ -1.38
CDHR3-209ENST00000472116 GAGE5Q13069 117 aa6.42□□□□□ -1.38
CDHR3-209ENST00000472116 GAGE13Q4V321 117 aa6.42□□□□□ -1.38
CDHR3-209ENST00000472116 TMEM229BQ8NBD8 167 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms