RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 VSTM2AQ8TAG5 236 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 TMEM167AQ8TBQ9 72 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 DYNLRB2Q8TF09 96 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 CYGBQ8WWM9 190 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 ISOC2Q96AB3 205 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 ARHGAP5-AS1Q96IT6 56 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 PHB2Q99623 299 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 MND1Q9BWT6 205 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 PECRQ9BY49 303 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 ZNF436Q9C0F3 470 aaPredicted RBP1.95□□□□□ -2.1
HDAC9-221ENST00000471887 WFDC10AQ9H1F0 79 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 OR2D2Q9H210 308 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 C11orf68Q9H3H3 251 aaKnown RBP1.95□□□□□ -2.1
HDAC9-221ENST00000471887 SLC2A9Q9NRM0 540 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 KLK5Q9Y337 293 aaPredicted RBP1.95□□□□□ -2.1
HDAC9-221ENST00000471887 TRAPPC1Q9Y5R8 145 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 HSPG2P98160 4391 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 PKHD1P08F94 4074 aa1.95□□□□□ -2.1
HDAC9-221ENST00000471887 APOBP04114 4563 aaKnown RBP1.94□□□□□ -2.1
HDAC9-221ENST00000471887 TRBV7-1A0A0A6YYK4 115 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 TRAV1-2A0A0B4J238 106 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 PNMA8CA0A1B0GUJ8 204 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 IGLC7A0M8Q6 106 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 PPP5D1E7EU14 171 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 NDUFA4O00483 81 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 CRYZL1O95825 349 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 LY6G6CO95867 125 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 DHFRP00374 187 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 PRH1P02810 166 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 CTXN2P0C2S0 81 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 CD36P16671 472 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 GNRHRP30968 328 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 RPL27AP46776 148 aaKnown RBP1.94□□□□□ -2.1
HDAC9-221ENST00000471887 PSMD7P51665 324 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 MLLT11Q13015 90 aaPredicted RBP1.94□□□□□ -2.1
HDAC9-221ENST00000471887 TRAM1Q15629 374 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 TNXAQ16473 311 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 LGALSLQ3ZCW2 172 aaPredicted RBP1.94□□□□□ -2.1
HDAC9-221ENST00000471887 OGFRL1Q5TC84 451 aaPredicted RBP1.94□□□□□ -2.1
HDAC9-221ENST00000471887 TMEM91Q6ZNR0 172 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 IDO2Q6ZQW0 420 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 AHSA2Q719I0 299 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 RPP25LQ8N5L8 163 aaKnown RBP1.94□□□□□ -2.1
HDAC9-221ENST00000471887 EIF4E3Q8N5X7 224 aaKnown RBP1.94□□□□□ -2.1
HDAC9-221ENST00000471887 OR5H2Q8NGV7 314 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 OR10J5Q8NHC4 309 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 OR51E2Q9H255 320 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 DCSTAMPQ9H295 470 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 BET1LQ9NYM9 111 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 MRPL27Q9P0M9 148 aaKnown RBP1.94□□□□□ -2.1
HDAC9-221ENST00000471887 RBMX2Q9Y388 322 aaKnown RBP1.94□□□□□ -2.1
HDAC9-221ENST00000471887 UFC1Q9Y3C8 167 aa1.94□□□□□ -2.1
HDAC9-221ENST00000471887 TRAV2A0A0B4J234 112 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 SERTM2A0A1B0GWG4 89 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 OR4C46A6NHA9 309 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 IFITM5A6NNB3 132 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 E7EUB6 86 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 PDCD5O14737 125 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 TGOLN2O43493 480 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 DENRO43583 198 aaKnown RBP1.93□□□□□ -2.1
HDAC9-221ENST00000471887 IGHV3-53P01767 116 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 HLA-AP01891 365 aaKnown RBP1.93□□□□□ -2.1
HDAC9-221ENST00000471887 GADD45AP24522 165 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 CLDN12P56749 244 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 RPS25P62851 125 aaKnown RBP1.93□□□□□ -2.1
HDAC9-221ENST00000471887 RPL30P62888 115 aaKnown RBP1.93□□□□□ -2.1
HDAC9-221ENST00000471887 PAFAH1B2P68402 229 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 MRPS15P82914 257 aaKnown RBP1.93□□□□□ -2.1
HDAC9-221ENST00000471887 FABP5Q01469 135 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 DEFB135Q30KP9 77 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 HACD4Q5VWC8 232 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 CLEC19AQ6UXS0 136 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 GDPD1Q8N9F7 314 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 BPIFB6Q8NFQ5 453 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 CACNG8Q8WXS5 425 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 ACOT12Q8WYK0 555 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 OR2A7Q96R45 310 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 GINS4Q9BRT9 223 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 ACOT13Q9NPJ3 140 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 NDUFB11Q9NX14 153 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 COMMD9Q9P000 198 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 PRELID3BQ9Y3B1 194 aa1.93□□□□□ -2.1
HDAC9-221ENST00000471887 DNAH5Q8TE73 4624 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 TRDV1A0A1B0GX56 115 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 GGTLC3B5MD39 225 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 K7EIM0 57 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 UPK2O00526 184 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 PSCAO43653 123 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 NDUFS5O43920 106 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 MRPS14O60783 128 aaKnown RBP1.92□□□□□ -2.1
HDAC9-221ENST00000471887 S1PR2O95136 353 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 PTTG1O95997 202 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 GCGP01275 180 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 APELAP0DMC3 54 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 NQO2P16083 231 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 ARPC4P59998 168 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 CATR1Q13166 79 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 LAMTOR1Q6IAA8 161 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 ZNF773Q6PK81 442 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 FAM231DQ6ZW35 169 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms