RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ZNF492Q9P255 531 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 MRPS16Q9Y3D3 137 aaKnown RBP5.52□□□□□ -1.53
USP48-207ENST00000471752 IGHV1OR15-1A0A075B7D0 117 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 INMT-MINDY4F8WBC2 141 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 HMGB3O15347 200 aaKnown RBP5.51□□□□□ -1.53
USP48-207ENST00000471752 GNRH2O43555 120 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 MPDU1O75352 247 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 UPK1BO75841 260 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 TCL1AP56279 114 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 LINC00315P59091 139 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 HBG1P69891 147 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 HBG2P69892 147 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 ANXA2RQ3ZCQ2 193 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 MAPKAPK5-AS1Q8N8E1 139 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 PPP1R1CQ8WVI7 109 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 MRPL53Q96EL3 112 aaKnown RBP5.51□□□□□ -1.53
USP48-207ENST00000471752 ZNF479Q96JC4 524 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 SGK494Q96LW2 274 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 LINC00467Q9BRT7 94 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 UPK3BQ9BT76 320 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 NDUFA13Q9P0J0 144 aa5.51□□□□□ -1.53
USP48-207ENST00000471752 TRAV8-1A0A0A6YYK1 113 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 LOC100131303A0A0U1RQF7 123 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 E5RGE8 158 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 H2AFB1P0C5Y9 115 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 DNAH10OSP0CZ25 163 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 ZNF138P52744 262 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 PDE6HQ13956 83 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 FFAR4Q5NUL3 377 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 MZT2BQ6NZ67 158 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 LYPD5Q6UWN5 251 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 HYLS1Q96M11 299 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 NMES1Q9C002 83 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 C11orf21Q9P2W6 132 aa5.5□□□□□ -1.53
USP48-207ENST00000471752 DIRC3C9JPN6 131 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 FAM229AH3BQW9 127 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 RGS13O14921 159 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 PAX4O43316 350 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 CDK2AP2O75956 126 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 NXPH4O95158 308 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 MPC2O95563 127 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 CRYBA4P53673 196 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 RAB2AP61019 212 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 GNG5P63218 68 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 TMEM183BQ1AE95 376 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 Q5BKY6 102 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 TMEM78Q5T7P6 136 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 TMEM183AQ8IXX5 376 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 ENKURQ8TC29 256 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 ST6GAL2Q96JF0 529 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 C18orf15Q96N68 181 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 MARVELD1Q9BSK0 173 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 HHLA3Q9XRX5 114 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 RNF24Q9Y225 148 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 PRELID1Q9Y255 219 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 HSPB11Q9Y547 144 aa5.49□□□□□ -1.53
USP48-207ENST00000471752 FLG2Q5D862 2391 aaPredicted RBP5.48□□□□□ -1.53
USP48-207ENST00000471752 IGHV3-16A0A0C4DH30 117 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 PGPA6NDG6 321 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 H3BNG1 76 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 OR7C2O60412 319 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 RPL12P30050 165 aaKnown RBP5.48□□□□□ -1.53
USP48-207ENST00000471752 ZNF80P51504 273 aaPredicted RBP5.48□□□□□ -1.53
USP48-207ENST00000471752 XGP55808 180 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 KRTAP10-1P60331 282 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 HAMPP81172 84 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 ZNF266Q14584 549 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 DPPA3Q6W0C5 159 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 WFDC10BQ8IUB3 73 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 ATP5SQ99766 215 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 SLC25A31Q9H0C2 315 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 AAMDCQ9H7C9 122 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 SCRT2Q9NQ03 307 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 MBD2Q9UBB5 411 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 RPH3ALQ9UNE2 315 aa5.48□□□□□ -1.53
USP48-207ENST00000471752 F6UZH7 168 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 K7EQD1 137 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 SIVA1O15304 175 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 SSNA1O43805 119 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 NMBP08949 121 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 UBE2L3P68036 154 aaKnown RBP5.47□□□□□ -1.53
USP48-207ENST00000471752 Q8N1X5 172 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 ZNF680Q8NEM1 530 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 S100ZQ8WXG8 99 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 MRPL32Q9BYC8 188 aaKnown RBP5.47□□□□□ -1.53
USP48-207ENST00000471752 Q9UF83 564 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 NAGKQ9UJ70 344 aa5.47□□□□□ -1.53
USP48-207ENST00000471752 LRP1Q07954 4544 aaKnown RBP5.47□□□□□ -1.53
USP48-207ENST00000471752 DMBT1Q9UGM3 2413 aaPredicted RBP5.46□□□□□ -1.53
USP48-207ENST00000471752 GYPEP15421 78 aa5.46□□□□□ -1.54
USP48-207ENST00000471752 BTF3P20290 206 aaKnown RBP5.46□□□□□ -1.54
USP48-207ENST00000471752 IBA57Q5T440 356 aaKnown RBP5.46□□□□□ -1.54
USP48-207ENST00000471752 Q6AWC8 147 aa5.46□□□□□ -1.54
USP48-207ENST00000471752 GOLT1AQ6ZVE7 132 aa5.46□□□□□ -1.54
USP48-207ENST00000471752 TMEM75Q8N9X5 138 aa5.46□□□□□ -1.54
USP48-207ENST00000471752 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
USP48-207ENST00000471752 PRO0255Q9UI72 69 aa5.46□□□□□ -1.54
USP48-207ENST00000471752 ICOSQ9Y6W8 199 aa5.46□□□□□ -1.54
USP48-207ENST00000471752 IGHV3-73A0A0B4J1V6 119 aa5.45□□□□□ -1.54
USP48-207ENST00000471752 A0A1W2PPQ1 181 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms