RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 LINC00467Q9BRT7 94 aa10.64□□□□□ -0.71
COL1A1-203ENST00000471344 Q9H3A6 140 aa10.64□□□□□ -0.71
COL1A1-203ENST00000471344 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
COL1A1-203ENST00000471344 TRGV2A0A075B6R0 118 aa10.63□□□□□ -0.71
COL1A1-203ENST00000471344 ZNF138P52744 262 aa10.63□□□□□ -0.71
COL1A1-203ENST00000471344 TCL1AP56279 114 aa10.63□□□□□ -0.71
COL1A1-203ENST00000471344 ESRGQ1W209 222 aa10.63□□□□□ -0.71
COL1A1-203ENST00000471344 ANXA2RQ3ZCQ2 193 aa10.63□□□□□ -0.71
COL1A1-203ENST00000471344 Q6ZNX1 250 aa10.63□□□□□ -0.71
COL1A1-203ENST00000471344 ASB13Q8WXK3 278 aa10.63□□□□□ -0.71
COL1A1-203ENST00000471344 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
COL1A1-203ENST00000471344 SPINK4O60575 86 aa10.62□□□□□ -0.71
COL1A1-203ENST00000471344 IFNA5P01569 189 aa10.62□□□□□ -0.71
COL1A1-203ENST00000471344 IGHV3-53P01767 116 aa10.62□□□□□ -0.71
COL1A1-203ENST00000471344 LYPD1Q8N2G4 141 aa10.62□□□□□ -0.71
COL1A1-203ENST00000471344 C6orf223Q8N319 242 aa10.62□□□□□ -0.71
COL1A1-203ENST00000471344 HSD17B11Q8NBQ5 300 aa10.62□□□□□ -0.71
COL1A1-203ENST00000471344 SCGB1C1Q8TD33 95 aa10.62□□□□□ -0.71
COL1A1-203ENST00000471344 SH3BGRL3Q9H299 93 aa10.62□□□□□ -0.71
COL1A1-203ENST00000471344 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
COL1A1-203ENST00000471344 TRBV7-9A0A0J9YWB2 115 aa10.61□□□□□ -0.71
COL1A1-203ENST00000471344 RGS13O14921 159 aa10.61□□□□□ -0.71
COL1A1-203ENST00000471344 MED14OSP0DP75 135 aa10.61□□□□□ -0.71
COL1A1-203ENST00000471344 RAB2AP61019 212 aa10.61□□□□□ -0.71
COL1A1-203ENST00000471344 MUC21Q5SSG8 566 aa10.61□□□□□ -0.71
COL1A1-203ENST00000471344 RPL7L1Q6DKI1 246 aaKnown RBP10.61□□□□□ -0.71
COL1A1-203ENST00000471344 Q9H8V8 135 aa10.61□□□□□ -0.71
COL1A1-203ENST00000471344 MUC4Q99102 2169 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 ABCA13Q86UQ4 5058 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 hCG_2014768A0A024R1R8 64 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 A0A096LPF7 62 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 RBAKDNA6NC62 111 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 HMGB3O15347 200 aaKnown RBP10.6□□□□□ -0.71
COL1A1-203ENST00000471344 ARPC5O15511 151 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 TAS2R45P59539 299 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 KHDC3LQ587J8 217 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 ST6GAL2Q96JF0 529 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 HYLS1Q96M11 299 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 RPH3ALQ9UNE2 315 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 APOBP04114 4563 aaKnown RBP10.6□□□□□ -0.71
COL1A1-203ENST00000471344 DNAH5Q8TE73 4624 aa10.6□□□□□ -0.71
COL1A1-203ENST00000471344 DIRC3C9JPN6 131 aa10.59□□□□□ -0.71
COL1A1-203ENST00000471344 H3BNG1 76 aa10.59□□□□□ -0.71
COL1A1-203ENST00000471344 ATP6V0CP27449 155 aa10.59□□□□□ -0.71
COL1A1-203ENST00000471344 CSN1S1P47710 185 aa10.59□□□□□ -0.71
COL1A1-203ENST00000471344 IBA57Q5T440 356 aaKnown RBP10.59□□□□□ -0.71
COL1A1-203ENST00000471344 C18orf15Q96N68 181 aa10.59□□□□□ -0.71
COL1A1-203ENST00000471344 CYTL1Q9NRR1 136 aa10.59□□□□□ -0.71
COL1A1-203ENST00000471344 MDFICQ9P1T7 246 aa10.59□□□□□ -0.71
COL1A1-203ENST00000471344 ZNF266Q14584 549 aa10.58□□□□□ -0.72
COL1A1-203ENST00000471344 INO80EQ8NBZ0 244 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-203ENST00000471344 ARPC5LQ9BPX5 153 aa10.58□□□□□ -0.72
COL1A1-203ENST00000471344 UPK3BQ9BT76 320 aa10.58□□□□□ -0.72
COL1A1-203ENST00000471344 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
COL1A1-203ENST00000471344 A0A1B0GVG6 124 aa10.57□□□□□ -0.72
COL1A1-203ENST00000471344 GNG5P63218 68 aa10.57□□□□□ -0.72
COL1A1-203ENST00000471344 ACOT6Q3I5F7 207 aaPredicted RBP10.57□□□□□ -0.72
COL1A1-203ENST00000471344 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
COL1A1-203ENST00000471344 PGPA6NDG6 321 aa10.56□□□□□ -0.72
COL1A1-203ENST00000471344 ZNF415Q09FC8 603 aa10.56□□□□□ -0.72
COL1A1-203ENST00000471344 PQLC2Q6ZP29 291 aa10.56□□□□□ -0.72
COL1A1-203ENST00000471344 TVP23CQ96ET8 276 aa10.56□□□□□ -0.72
COL1A1-203ENST00000471344 OTORQ9NRC9 128 aa10.56□□□□□ -0.72
COL1A1-203ENST00000471344 LENEPQ9Y5L5 61 aa10.56□□□□□ -0.72
COL1A1-203ENST00000471344 F6UZH7 168 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 PAX4O43316 350 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 SFTA3P0C7M3 94 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 FHL2Q14192 279 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 TMEM183BQ1AE95 376 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 Q6AWC8 147 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 GOLT1AQ6ZVE7 132 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 TMEM183AQ8IXX5 376 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 ARL6IP6Q8N6S5 226 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 OR2G3Q8NGZ4 309 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 C8orf49Q96NF6 230 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 NAGKQ9UJ70 344 aa10.55□□□□□ -0.72
COL1A1-203ENST00000471344 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 C16orf90A8MZG2 172 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 ARL14EPLP0DKL9 152 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 FAM74A1Q5RGS3 127 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 KCNRGQ8N5I3 272 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 OR10G4Q8NGN3 311 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 OR10G9Q8NGN4 311 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 OR10G7Q8NGN6 311 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 SGK494Q96LW2 274 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 PSMG3Q9BT73 122 aaPredicted RBP10.54□□□□□ -0.72
COL1A1-203ENST00000471344 KRTAP4-5Q9BYR2 181 aa10.54□□□□□ -0.72
COL1A1-203ENST00000471344 CRYBA4P53673 196 aa10.53□□□□□ -0.72
COL1A1-203ENST00000471344 ZNF726P1Q15940 193 aa10.53□□□□□ -0.72
COL1A1-203ENST00000471344 TTC32Q5I0X7 151 aa10.53□□□□□ -0.72
COL1A1-203ENST00000471344 CMTM2Q8TAZ6 248 aa10.53□□□□□ -0.72
COL1A1-203ENST00000471344 ICOSQ9Y6W8 199 aa10.53□□□□□ -0.72
COL1A1-203ENST00000471344 GNRH2O43555 120 aa10.52□□□□□ -0.73
COL1A1-203ENST00000471344 NXPH4O95158 308 aa10.52□□□□□ -0.73
COL1A1-203ENST00000471344 CDC34P49427 236 aaPredicted RBP10.52□□□□□ -0.73
COL1A1-203ENST00000471344 FAM159AQ6UWV7 190 aa10.52□□□□□ -0.73
COL1A1-203ENST00000471344 PRO0255Q9UI72 69 aa10.52□□□□□ -0.73
COL1A1-203ENST00000471344 HHLA3Q9XRX5 114 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms