RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 SRRM2Q9UQ35 2752 aaKnown RBP3.34□□□□□ -1.88
CKS1B-204ENST00000471245 TRAV10A0A0B4J240 114 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 F5H768 121 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 UBBP0CG47 229 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 HLA-DMBP28068 263 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 S100A5P33763 92 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 CLDN12P56749 244 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 EIF4EBP1Q13541 118 aaPredicted RBP3.33□□□□□ -1.88
CKS1B-204ENST00000471245 PMVKQ15126 192 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 C1orf134Q5TEV5 83 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 ZFP1Q6P2D0 407 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 TMEM91Q6ZNR0 172 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 STOML3Q8TAV4 291 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 ACOT12Q8WYK0 555 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 PHB2Q99623 299 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 CHCHD7Q9BUK0 85 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 SCRT1Q9BWW7 348 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 FKBP14Q9NWM8 211 aa3.33□□□□□ -1.88
CKS1B-204ENST00000471245 LSM2Q9Y333 95 aaKnown RBP3.33□□□□□ -1.88
CKS1B-204ENST00000471245 IGHV3OR16-8A0A075B7F1 116 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 TRAV3A0A0B4J244 114 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 EFCAB10A6NFE3 127 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 J3QRK9 145 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 REG1AP05451 166 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 CDK1P06493 297 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 UCHL1P09936 223 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 MYL12AP19105 171 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 MAP2K4P45985 399 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 HBG1P69891 147 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 HBG2P69892 147 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 MLLT11Q13015 90 aaPredicted RBP3.32□□□□□ -1.88
CKS1B-204ENST00000471245 CDK10Q15131 360 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 RTL8BQ17RB0 113 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 C4orf26Q17RF5 130 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 VMA21Q3ZAQ7 101 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 PDZD11Q5EBL8 140 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 H1FOOQ8IZA3 346 aaPredicted RBP3.32□□□□□ -1.88
CKS1B-204ENST00000471245 Q8NAQ8 132 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 OR4A5Q8NH83 315 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 SLC25A46Q96AG3 418 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 SPIN2AQ99865 258 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 SPIN2BQ9BPZ2 258 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 CMSS1Q9BQ75 279 aaKnown RBP3.32□□□□□ -1.88
CKS1B-204ENST00000471245 C9orf16Q9BUW7 83 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 SLC2A9Q9NRM0 540 aa3.32□□□□□ -1.88
CKS1B-204ENST00000471245 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
CKS1B-204ENST00000471245 DEFB131BA0A096LNP1 70 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 IGLC7A0M8Q6 106 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 MFNGO00587 321 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 CCNKO75909 580 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 IFNA10P01566 189 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 RPL27AP46776 148 aaKnown RBP3.31□□□□□ -1.88
CKS1B-204ENST00000471245 NKX2-5P52952 324 aaPredicted RBP3.31□□□□□ -1.88
CKS1B-204ENST00000471245 TAS2R43P59537 309 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 HSD17B12Q53GQ0 312 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 GLT8D1Q68CQ7 371 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 ZNF773Q6PK81 442 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 FAM19A5Q7Z5A7 132 aaPredicted RBP3.31□□□□□ -1.88
CKS1B-204ENST00000471245 OR10J5Q8NHC4 309 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 TMEM167AQ8TBQ9 72 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 CYGBQ8WWM9 190 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 TMEM203Q969S6 136 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 PTH2Q96A98 100 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 SMIM8Q96KF7 97 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 ZNF436Q9C0F3 470 aaPredicted RBP3.31□□□□□ -1.88
CKS1B-204ENST00000471245 OR51E2Q9H255 320 aa3.31□□□□□ -1.88
CKS1B-204ENST00000471245 MRPL27Q9P0M9 148 aaKnown RBP3.31□□□□□ -1.88
CKS1B-204ENST00000471245 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 IGHV3-49A0A0A0MS15 119 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 IGHV3-21A0A0B4J1V1 117 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 TINCRA0A1B0GVN0 87 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 IRGMA1A4Y4 181 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 OR4C46A6NHA9 309 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 ATP5HO75947 161 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 ATP6V1G2O95670 118 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 IFNA21P01568 189 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 IFNA17P01571 189 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 HLA-DQB1P01920 261 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 CTSDP07339 412 aaPredicted RBP3.3□□□□□ -1.88
CKS1B-204ENST00000471245 PTHLHP12272 177 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 NFYAP23511 347 aaPredicted RBP3.3□□□□□ -1.88
CKS1B-204ENST00000471245 SERPINB10P48595 397 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 PSMD7P51665 324 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 RPS25P62851 125 aaKnown RBP3.3□□□□□ -1.88
CKS1B-204ENST00000471245 Q6ZS49 121 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 ZNF767PQ75MW2 155 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 SPATA12Q7Z6I5 190 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 UBE2DNLQ8IWF7 75 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 FAM24BQ8N5W8 94 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 ZNF555Q8NEP9 628 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 FMC1Q96HJ9 113 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 OR2A7Q96R45 310 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 C6orf62Q9GZU0 229 aaPredicted RBP3.3□□□□□ -1.88
CKS1B-204ENST00000471245 HRASLSQ9HDD0 168 aa3.3□□□□□ -1.88
CKS1B-204ENST00000471245 TRBV7-1A0A0A6YYK4 115 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 OR2T8A6NH00 312 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 TGOLN2O43493 480 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 DENRO43583 198 aaKnown RBP3.29□□□□□ -1.88
CKS1B-204ENST00000471245 IFNA5P01569 189 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms