RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 SPATA3Q8NHX4 192 aa7.25□□□□□ -1.25
CCM2-204ENST00000470837 ZC2HC1AQ96GY0 325 aa7.25□□□□□ -1.25
CCM2-204ENST00000470837 MLST8Q9BVC4 326 aa7.25□□□□□ -1.25
CCM2-204ENST00000470837 TUBA4BQ9H853 241 aa7.25□□□□□ -1.25
CCM2-204ENST00000470837 OSTCQ9NRP0 149 aa7.25□□□□□ -1.25
CCM2-204ENST00000470837 A0A087WWC5 75 aa7.24□□□□□ -1.25
CCM2-204ENST00000470837 TRAV21A0A0B4J279 112 aa7.24□□□□□ -1.25
CCM2-204ENST00000470837 ORM1P02763 201 aa7.24□□□□□ -1.25
CCM2-204ENST00000470837 PFN1P07737 140 aaKnown RBP7.24□□□□□ -1.25
CCM2-204ENST00000470837 CRISP2P16562 243 aa7.24□□□□□ -1.25
CCM2-204ENST00000470837 RPL19P84098 196 aaKnown RBP7.24□□□□□ -1.25
CCM2-204ENST00000470837 OXLD1Q5BKU9 147 aa7.24□□□□□ -1.25
CCM2-204ENST00000470837 KCNIP4Q6PIL6 250 aa7.24□□□□□ -1.25
CCM2-204ENST00000470837 COX8CQ7Z4L0 72 aa7.24□□□□□ -1.25
CCM2-204ENST00000470837 CLUHP3Q96NS8 147 aa7.24□□□□□ -1.25
CCM2-204ENST00000470837 RNASE7Q9H1E1 156 aaKnown RBP7.24□□□□□ -1.25
CCM2-204ENST00000470837 RPP21Q9H633 154 aaKnown RBP7.24□□□□□ -1.25
CCM2-204ENST00000470837 SMCO4Q9NRQ5 59 aa7.24□□□□□ -1.25
CCM2-204ENST00000470837 C7orf71A4D174 169 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 TMEM189A5PLL7 270 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 A8MWL6 223 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 SH2D1AO60880 128 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 RPS20P60866 119 aaKnown RBP7.23□□□□□ -1.25
CCM2-204ENST00000470837 ZNF124Q15973 351 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 SPINK13Q1W4C9 94 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 MORN3Q6PF18 240 aaPredicted RBP7.23□□□□□ -1.25
CCM2-204ENST00000470837 NUDT10Q8NFP7 164 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 OR2D3Q8NGH3 330 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 NUDT11Q96G61 164 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 C1QTNF4Q9BXJ3 329 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 TMEM242Q9NWH2 141 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 NAGKQ9UJ70 344 aa7.23□□□□□ -1.25
CCM2-204ENST00000470837 CXorf65A6NEN9 183 aa7.22□□□□□ -1.25
CCM2-204ENST00000470837 M0R2Z0 102 aa7.22□□□□□ -1.25
CCM2-204ENST00000470837 INSP01308 110 aa7.22□□□□□ -1.25
CCM2-204ENST00000470837 FXYD7P58549 80 aa7.22□□□□□ -1.25
CCM2-204ENST00000470837 TRPT1Q86TN4 253 aaKnown RBP7.22□□□□□ -1.25
CCM2-204ENST00000470837 DEFB125Q8N687 156 aa7.22□□□□□ -1.25
CCM2-204ENST00000470837 ZFAND2AQ8N6M9 145 aa7.22□□□□□ -1.25
CCM2-204ENST00000470837 FAM19A4Q96LR4 140 aa7.22□□□□□ -1.25
CCM2-204ENST00000470837 TMEM208Q9BTX3 173 aa7.22□□□□□ -1.25
CCM2-204ENST00000470837 SRD5A3Q9H8P0 318 aa7.22□□□□□ -1.25
CCM2-204ENST00000470837 STAB1Q9NY15 2570 aa7.21□□□□□ -1.25
CCM2-204ENST00000470837 TRAV12-2A0A075B6T6 113 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 TRAV12-3A0A0B4J271 114 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 C19orf71A6NCJ1 209 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 KLLNB2CW77 178 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 RPL35AP18077 110 aaKnown RBP7.21□□□□□ -1.26
CCM2-204ENST00000470837 BTN1A1Q13410 526 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 KRTAP21-3Q3LHN1 58 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 CT83Q5H943 113 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 ATRAIDQ6UW56 229 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 FAM159AQ6UWV7 190 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 BORCS7Q96B45 105 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 BTF3L4Q96K17 158 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 KCNS1Q96KK3 526 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 WFDC10AQ9H1F0 79 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 C19orf73Q9NVV2 129 aa7.21□□□□□ -1.26
CCM2-204ENST00000470837 TMSB15BA0A087X1C1 80 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 LOC102724200A0A096LPH7 203 aaPredicted RBP7.2□□□□□ -1.26
CCM2-204ENST00000470837 A8MTW9 85 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 S100A4P26447 101 aaKnown RBP7.2□□□□□ -1.26
CCM2-204ENST00000470837 CRIP1P50238 77 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 ZNF80P51504 273 aaPredicted RBP7.2□□□□□ -1.26
CCM2-204ENST00000470837 APOC4P55056 127 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 EGFEM1PQ0D2K5 195 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 GFI1BQ5VTD9 330 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 Q6AWC8 147 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 TMEM88Q6PEY1 159 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 AMTNQ6UX39 209 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 LINC00322Q6ZN03 302 aaPredicted RBP7.2□□□□□ -1.26
CCM2-204ENST00000470837 TSKUQ8WUA8 353 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 IMMP2LQ96T52 175 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 C20orf144Q9BQM9 153 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 IL36BQ9NZH7 164 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 V9GYV3 84 aa7.2□□□□□ -1.26
CCM2-204ENST00000470837 G3V4G9 280 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 SCO1O75880 301 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 CA1P00915 261 aaPredicted RBP7.19□□□□□ -1.26
CCM2-204ENST00000470837 LINC01559Q495D7 138 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 TMEM256Q8N2U0 113 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 LINC01587Q99440 93 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 TPPP3Q9BW30 176 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 GFRA4Q9GZZ7 299 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 CSTL1Q9H114 145 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 XCL2Q9UBD3 114 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 NAT8BQ9UHF3 227 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 GOLT1BQ9Y3E0 138 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 URGCP-MRPS24S4R325 110 aa7.19□□□□□ -1.26
CCM2-204ENST00000470837 A0A1W2PPQ1 181 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 FAM231BA6NCW3 169 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 RBMY1BA6NDE4 496 aaKnown RBP7.18□□□□□ -1.26
CCM2-204ENST00000470837 RBMY1EA6NEQ0 496 aaKnown RBP7.18□□□□□ -1.26
CCM2-204ENST00000470837 CBY3A6NI87 242 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 RBMY1DP0C7P1 496 aaKnown RBP7.18□□□□□ -1.26
CCM2-204ENST00000470837 HTN1P15515 57 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 ASIPP42127 132 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 TCL1AP56279 114 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 MUC21Q5SSG8 566 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 PRR9Q5T870 116 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms